G659451


Basic Information

Item Value
gene id G659451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 86685091 ~ 86686391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU749966
aatcgACCCAGGATTTAAAACTCTCGGAGAGGAAGTGAGGTTCTTTGCCGAGACAAAACAGATCCATGACTTCgtccccaaaatggcaccctattcactatgtagtccactagttttgaccagagccttatgggtcctagtcaaaagtagtgcacgatatagggaatatggtgccattttggatgcggACCCATCTTTTCATATGCAGTTAAGGAACAATACGCTTCACCCAGCCAATCCCAGCCCACAACATGGCCAGACCAGCTGCAGGAGCTAGTCTCTGCCTAGGACTGTCTCTACACTACACCATCTCTGTgctagtctctccctctctcctccctctccccttcttttTGAATCTATCTTTCTCCAGAGTACTAGTTTATGTGCCTAGAAGTGATATAGGCTTCGCCACTGTGCAAACTGCATTAGATCATCGTTACAAAcatagacaacaacaaaaaaaatacaaaaaacaacCAGAATATTATGAAAAGTACATTTCTCTTGGTCTGTTTTGTCTTTAGTTATAGAGTCTCCTTTCGATGTTCAAGTGCTTCTGTTTCTGGTTTTGGACAGGTACGATTCTCGTAGTAGTaggagacatacagtatgtccatACATATGTGTCTAAATGTATACAAATATACAAATGTATGTAGACATACATTAGTACTTGTACATGTTATATGCATCACTTGAACATACTTGTGTTTGTGTTAAAAAATATCTTTGTtttaaataaaaatttaaaaaatccaaACCTACACTCAGTAGGGTGAGATCACCTCCGTAAAGATGACCCCCAGACACTGCAACACATTGGCACCATCTTCGTCATTCAGTAGGGTGAGATCACCCCCGTAAAGgtgaccccccccccagacactgcAACACATTGGCACCATTATCATCAGGAGGTTGTTGACGAGGTCGTCTCCCAAGAGGACAACAATAAATGAATGACTGGAGCAGATACACaatttgttttctgtctttgtatgACAACACTCTGTGTTCTGTTCTTCTATGTTCTGCTCTTCtatgttcttctctgttctgttcCTTCtatgttctgttcttctctgttctgttcttctctgttctgttcttctctgttctgctcttctatgttctgttcttctctgttctgctcttctATGTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU749966 True 1167 lncRNA 0.41 2 86685091 86686391

Neighbor

gene id symbol gene type direction distance location
slc6a11b slc6a11 coding upstream 279062 86344725 ~ 86406029 (+)
atp2b2 LOC106566233 coding upstream 379557 86102263 ~ 86305534 (+)
LOC110528658 slc6a1 coding upstream 651530 86018075 ~ 86033561 (+)
vgll4b vgll4 coding upstream 940297 85649845 ~ 85744794 (+)
tamm41 tamm41 coding upstream 1036450 85630978 ~ 85648641 (+)
LOC110488455 LOC106583799 coding downstream 299160 86985551 ~ 87051602 (+)
LOC110488454 NA coding downstream 318525 86927892 ~ 87007309 (+)
si:dkey-42i9.4 btg1 coding downstream 368123 87054514 ~ 87056155 (+)
ippk ippk coding downstream 379771 87066162 ~ 87106788 (+)
ecm2 ecm2 coding downstream 430369 87116760 ~ 87156905 (+)
G659450 NA non-coding upstream 1822 86676448 ~ 86683269 (+)
G659452 NA non-coding upstream 3599 86675467 ~ 86681492 (+)
G659159 NA non-coding upstream 96622 86588263 ~ 86588469 (+)
G659157 NA non-coding upstream 97937 86586611 ~ 86587154 (+)
G659155 NA non-coding upstream 101556 86582375 ~ 86583535 (+)
G659498 NA non-coding downstream 76767 86763158 ~ 86765882 (+)
G659623 NA non-coding downstream 239702 86926093 ~ 86926300 (+)
G659640 LOC106583798 non-coding downstream 258407 86944798 ~ 86967074 (+)
G659136 NA other upstream 163269 86521060 ~ 86521822 (+)
G659058 NA other upstream 272506 86408702 ~ 86412974 (+)
G658887 NA other upstream 788942 85895826 ~ 85896149 (+)
G658885 NA other upstream 797970 85886592 ~ 85887121 (+)
G657481 NA other upstream 1677593 85006479 ~ 85007498 (+)
G659706 NA other downstream 414073 87100464 ~ 87102270 (+)
nisch LOC106583810 other downstream 698508 87346077 ~ 87387283 (+)
G660790 NA other downstream 1736373 88422764 ~ 88427927 (+)
G660853 NA other downstream 1935922 88622313 ~ 88689342 (+)
G660886 NA other downstream 2005503 88691894 ~ 88694076 (+)

Expression


Co-expression Network