Gene
RNA
| Item | Value |
|---|---|
| gene id | G659498 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 86763158 ~ 86765882 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU750017 | True | 358 | lncRNA | 0.47 | 2 | 86763158 | 86765882 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc6a11b | slc6a11 | coding | upstream | 357129 | 86344725 ~ 86406029 (+) |
| atp2b2 | LOC106566233 | coding | upstream | 457624 | 86102263 ~ 86305534 (+) |
| LOC110528658 | slc6a1 | coding | upstream | 729597 | 86018075 ~ 86033561 (+) |
| vgll4b | vgll4 | coding | upstream | 1018364 | 85649845 ~ 85744794 (+) |
| tamm41 | tamm41 | coding | upstream | 1114517 | 85630978 ~ 85648641 (+) |
| LOC110488455 | LOC106583799 | coding | downstream | 219669 | 86985551 ~ 87051602 (+) |
| LOC110488454 | NA | coding | downstream | 239034 | 86927892 ~ 87007309 (+) |
| si:dkey-42i9.4 | btg1 | coding | downstream | 288632 | 87054514 ~ 87056155 (+) |
| ippk | ippk | coding | downstream | 300280 | 87066162 ~ 87106788 (+) |
| ecm2 | ecm2 | coding | downstream | 350878 | 87116760 ~ 87156905 (+) |
| G659451 | NA | non-coding | upstream | 76767 | 86685091 ~ 86686391 (+) |
| G659450 | NA | non-coding | upstream | 79889 | 86676448 ~ 86683269 (+) |
| G659452 | NA | non-coding | upstream | 81666 | 86675467 ~ 86681492 (+) |
| G659159 | NA | non-coding | upstream | 174689 | 86588263 ~ 86588469 (+) |
| G659157 | NA | non-coding | upstream | 176004 | 86586611 ~ 86587154 (+) |
| G659623 | NA | non-coding | downstream | 160211 | 86926093 ~ 86926300 (+) |
| G659640 | LOC106583798 | non-coding | downstream | 178916 | 86944798 ~ 86967074 (+) |
| G659668 | NA | non-coding | downstream | 246611 | 87012493 ~ 87013162 (+) |
| G659136 | NA | other | upstream | 241336 | 86521060 ~ 86521822 (+) |
| G659058 | NA | other | upstream | 350573 | 86408702 ~ 86412974 (+) |
| G658887 | NA | other | upstream | 867009 | 85895826 ~ 85896149 (+) |
| G658885 | NA | other | upstream | 876037 | 85886592 ~ 85887121 (+) |
| G657481 | NA | other | upstream | 1755660 | 85006479 ~ 85007498 (+) |
| G659706 | NA | other | downstream | 334582 | 87100464 ~ 87102270 (+) |
| nisch | LOC106583810 | other | downstream | 619017 | 87346077 ~ 87387283 (+) |
| G660790 | NA | other | downstream | 1656882 | 88422764 ~ 88427927 (+) |
| G660853 | NA | other | downstream | 1856431 | 88622313 ~ 88689342 (+) |
| G660886 | NA | other | downstream | 1926012 | 88691894 ~ 88694076 (+) |
