G659623


Basic Information

Item Value
gene id G659623
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 86926093 ~ 86926300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU750177
AGTCCAGCTGTCTTGTGAAGAAACGGGGGAAAAAAATGTAAGGGTAGTGGTTGACCAGTCTTTGTCCCGTGATGAAGTGGTTGTAGATTGGTTTTGTCAGaattgacttttcgtagcaggaaAGGAGAACTTACGCagaaggttaggagaattaggtcaAGTAAAggaaaaggtttagggttagctaaaatgcaaagaaaatctacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU750177 True 208 lncRNA 0.41 1 86926093 86926300

Neighbor

gene id symbol gene type direction distance location
slc6a11b slc6a11 coding upstream 520064 86344725 ~ 86406029 (+)
atp2b2 LOC106566233 coding upstream 620559 86102263 ~ 86305534 (+)
LOC110528658 slc6a1 coding upstream 892532 86018075 ~ 86033561 (+)
vgll4b vgll4 coding upstream 1181299 85649845 ~ 85744794 (+)
tamm41 tamm41 coding upstream 1277452 85630978 ~ 85648641 (+)
LOC110488455 LOC106583799 coding downstream 59251 86985551 ~ 87051602 (+)
LOC110488454 NA coding downstream 78616 86927892 ~ 87007309 (+)
si:dkey-42i9.4 btg1 coding downstream 128214 87054514 ~ 87056155 (+)
ippk ippk coding downstream 139862 87066162 ~ 87106788 (+)
ecm2 ecm2 coding downstream 190460 87116760 ~ 87156905 (+)
G659498 NA non-coding upstream 160211 86763158 ~ 86765882 (+)
G659451 NA non-coding upstream 239702 86685091 ~ 86686391 (+)
G659450 NA non-coding upstream 242824 86676448 ~ 86683269 (+)
G659452 NA non-coding upstream 244601 86675467 ~ 86681492 (+)
G659159 NA non-coding upstream 337624 86588263 ~ 86588469 (+)
G659640 LOC106583798 non-coding downstream 18498 86944798 ~ 86967074 (+)
G659668 NA non-coding downstream 86193 87012493 ~ 87013162 (+)
G659672 NA non-coding downstream 90064 87016364 ~ 87017560 (+)
G659136 NA other upstream 404271 86521060 ~ 86521822 (+)
G659058 NA other upstream 513508 86408702 ~ 86412974 (+)
G658887 NA other upstream 1029944 85895826 ~ 85896149 (+)
G658885 NA other upstream 1038972 85886592 ~ 85887121 (+)
G657481 NA other upstream 1918595 85006479 ~ 85007498 (+)
G659706 NA other downstream 174164 87100464 ~ 87102270 (+)
nisch LOC106583810 other downstream 458599 87346077 ~ 87387283 (+)
G660790 NA other downstream 1496464 88422764 ~ 88427927 (+)
G660853 NA other downstream 1696013 88622313 ~ 88689342 (+)
G660886 NA other downstream 1765594 88691894 ~ 88694076 (+)

Expression


Co-expression Network