Gene
RNA
| Item | Value |
|---|---|
| gene id | G659846 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 86946470 ~ 86947219 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: stress protein DDR48-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU750505 | True | 568 | lncRNA | 0.38 | 2 | 86946470 | 86947219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| poc1a | poc1a | coding | downstream | 125957 | 86723768 ~ 86820513 (-) |
| LOC118965395 | NA | coding | downstream | 231294 | 86714279 ~ 86715176 (-) |
| LOC110528661 | dusp7 | coding | downstream | 242382 | 86686272 ~ 86704088 (-) |
| slc6a1b | slc6a1 | coding | downstream | 396796 | 86517494 ~ 86549674 (-) |
| LOC118965394 | NA | coding | downstream | 939414 | 86004625 ~ 86007056 (-) |
| atrip | atrip | coding | upstream | 60219 | 87007438 ~ 87053874 (-) |
| LOC118965396 | NA | coding | upstream | 111049 | 87058268 ~ 87059864 (-) |
| LOC110528667 | cenpp | coding | upstream | 166885 | 87114104 ~ 87293966 (-) |
| wu:fb55g09 | cl012 | coding | upstream | 393970 | 87341189 ~ 87342665 (-) |
| si:dkeyp-87e7.4 | LOC106583812 | coding | upstream | 462961 | 87410180 ~ 87425169 (-) |
| G659841 | NA | non-coding | downstream | 1958 | 86941822 ~ 86944512 (-) |
| G659619 | NA | non-coding | downstream | 57958 | 86888026 ~ 86888512 (-) |
| G659614 | NA | non-coding | downstream | 113068 | 86832731 ~ 86833402 (-) |
| G659567 | NA | non-coding | downstream | 178711 | 86705334 ~ 86767759 (-) |
| G659881 | NA | non-coding | upstream | 85583 | 87032802 ~ 87033655 (-) |
| G659907 | NA | non-coding | upstream | 150656 | 87097875 ~ 87102174 (-) |
| G659925 | NA | non-coding | upstream | 181076 | 87128295 ~ 87128815 (-) |
| G659930 | NA | non-coding | upstream | 199470 | 87146689 ~ 87147130 (-) |
| G659936 | NA | non-coding | upstream | 211178 | 87158397 ~ 87159244 (-) |
| G659543 | NA | other | downstream | 312614 | 86632407 ~ 86633856 (-) |
| G659250 | NA | other | downstream | 785547 | 86160242 ~ 86160923 (-) |
| G658255 | NA | other | downstream | 1938965 | 85006726 ~ 85007505 (-) |
| LOC110528632 | LOC105007334 | other | downstream | 2989702 | 83954195 ~ 84332909 (-) |
| G656671 | dag1 | other | downstream | 3330472 | 83608532 ~ 83615998 (-) |
| G659824 | NA | other | upstream | 56517 | 87003736 ~ 87007292 (-) |
| LOC110528687 | LOC106583825 | other | upstream | 1305844 | 88253063 ~ 88345745 (-) |
| G661128 | NA | other | upstream | 1812274 | 88759493 ~ 88759938 (-) |
| G661426 | LOC106583832 | other | upstream | 2105857 | 89053076 ~ 89061481 (-) |
