G659824


Basic Information

Item Value
gene id G659824
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87003736 ~ 87007292 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU750481
ttatttgTCATTGTAGCAAAAAAAGTAGCATTTTATTCCTGATAACATTTTAAAAACTACAGCATTTCATTTACTCAGTTCGAACAAGCAGCTCGCTAAAGCAGATATGGCTGACGAAGGTGCTCACAACCTGAAGTCACATGAACAACAGACGAAGGCTGGTATCCTGTCACAACATGAATCATAATACCCATCTGAATGTCAGGGTAAACCTACACGAAACGTTTCCAAAATcccctatgggggggggggggggggacgattggaaccatttccctgttttgactaggttttatgggtattatgacacatCCACTGTGGGGgctctcaaactcaactctggacctcaaagccagttccactgcgttTTCAGTGTTCCCCTCTaaaatcagggactgatttttAGACctggggacaccaggtgggtccgatttaatgatcaggtagaacagaaaaccagcagcaGTCTCCGTCCCTCGTTgggtcagagttgaatacccctgacatAGGATAGAAACACGTGTGCCGCGGACAAAACAACCCTGAGCAACAAGGGTTTTCTAACGACGAGGGTCGTGTAAAAAAAATAAGAGTGCAACAGCATACTGCACGCAGACAGAAATACAACCAATAGCAGCCGACATGATTCTTCACTCCAAACATGTCAACCGCATGCATGTTCTACACAGCATATTTCTACACTGACCTTTCCAGACCCCGACTTCACAGATACAGTGTGGAAAACCAGGGCTGGCTCCCAAAATAGTGCACTGCCTTTGACCATAGgacctcaaaagtagtgcacttttatatagggaatggggagccatttgggatgcacacagggACATTATCAACAGGTCAATCACATTAAAAAGAAATTAAAAAGCATTACATTTAATTTAAAGGCTGGTAGCGCTTCATTCAGCTTGGTTCACCTGCAAGGCTTGGTACAGAATGATCTCACAGCATAAGTAAAGAAAAAACAAGGCATATTGTGGAGGTTTAacagtccaaaatggcaccctattccctacataggggcACTACTTTTGAGTTCATTGGGCTCTGGACAAAAGCAGTGCCCTACATGGGGGCATAGACATTTTAAAGCGGTGTCTAAAAACCACACACACTGatggttttattttttttaaatatatatatataatttggtTGGACCAAGAAtttatggtaaaaaaataaaaaaggcacAACTGTTTCTGTACGAGACAGGACATCCGTTTTACCACTAAACTAGGTATATTTCATAATTGTGTGAATGAGGATTCAGACATTATTCTACTTTACGTCCGTCCAACTACAGTGCAAAATGTTTTAAACCACAGTTTGGGGTTGCACAATGAAGACCGAGGCACAGCAATACATGAAGATTCCCTTTagactgtaataataatatacCTGGCCCTAACAAGGTATAGGATtcatcccaaacagcaccctattccctatgtagtgcactacgtttgaccaggatagtgcactacatagagaatagggtgctgttAGGGATGCAAGCCAGCTCAGTTCTCTCCCAGGTGAGCTCTAGAAGCTCAGTGAATGGGACATGTTTGGGGTGGTGGGGAACGGGAGGGAGACCTGTGGGCGATGGAGAGAACTGCTTCAGacagtgggtggatggatggagaatgggagggagggagacctgtgggagatggggagagaactGCTTCAGgcagtgggtggatggatggagaatgggagggagggagacctgTGGGTGATGGGGAGAGAACTGCTTCAGgcagtgggtggatggatggagaatgggagggagaactGTGGGTGATGAGAGAGAACTGCGTCAGACAGTGATGGAGAGAGAACTGCTTCAGACAGTGATGGAGAGAGAACTGCTTCAGACAGTGGGTGgatggagaatgggagagagaactGCTTCAGacagtggatggatggagggagggagacctgtgggtgatggagagagaactGCTTCAGACAGTGGGTgatggagaatgggagggagaactGCTTCAGACAGTGGGTgatggagaatgggagggagaactGCGTCAGACAGTGGGTgatggagaatgggagggagaactGCGTCAGTGGGTGATGGAGAATGGGAGGGAGAACTGCGACAGTGGGTgatggagaatTATGAGGGAGAACTGCGTCAGACAGTGATGGAGAATTGGCTCAGTAGCCAGTCTTCGGAGGTTGGGAGTCCACGAAGGCAGGGTTGTAGGCAGGCTGGGCAGAGAGGAAGTCAGGCTGAGCGGGAGGCGCGCCAGCTTGGGCTGGGTGGCTGGGCTGCTGGGCTGGGTAGCCGGGCTGAGCTGGAGGCTGGAAGGGGTAAGATGGTTGTCCTGGACTGAACCCAGCCTGACTATAAGGCACTTGGATAGCAGGAGGATAGGctgaacctgagagagagagagagagagagaggactttaCCACACCAGACAGAGGTGGTGTTTTTTGGGAAACTAGTCATAAGGTGGAACTAGAATGCTTCGACAGCAACCTGGAG

Function

NR:

description
protein shisa-5-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU750481 True 2544 TUCP 0.48 4 87003736 87007292

Neighbor

gene id symbol gene type direction distance location
LOC110528663 LOC106583798 coding downstream 36744 86944797 ~ 86966992 (-)
poc1a poc1a coding downstream 183223 86723768 ~ 86820513 (-)
LOC118965395 NA coding downstream 288560 86714279 ~ 86715176 (-)
LOC110528661 dusp7 coding downstream 299648 86686272 ~ 86704088 (-)
slc6a1b slc6a1 coding downstream 454062 86517494 ~ 86549674 (-)
atrip atrip coding upstream 146 87007438 ~ 87053874 (-)
LOC118965396 NA coding upstream 50976 87058268 ~ 87059864 (-)
LOC110528667 cenpp coding upstream 106812 87114104 ~ 87293966 (-)
wu:fb55g09 cl012 coding upstream 333897 87341189 ~ 87342665 (-)
si:dkeyp-87e7.4 LOC106583812 coding upstream 402888 87410180 ~ 87425169 (-)
G659846 NA non-coding downstream 56517 86946470 ~ 86947219 (-)
G659841 NA non-coding downstream 59224 86941822 ~ 86944512 (-)
G659619 NA non-coding downstream 115224 86888026 ~ 86888512 (-)
G659614 NA non-coding downstream 170334 86832731 ~ 86833402 (-)
G659567 NA non-coding downstream 235977 86705334 ~ 86767759 (-)
G659881 NA non-coding upstream 25510 87032802 ~ 87033655 (-)
G659907 NA non-coding upstream 90583 87097875 ~ 87102174 (-)
G659925 NA non-coding upstream 121003 87128295 ~ 87128815 (-)
G659930 NA non-coding upstream 139397 87146689 ~ 87147130 (-)
G659936 NA non-coding upstream 151105 87158397 ~ 87159244 (-)
G659543 NA other downstream 369880 86632407 ~ 86633856 (-)
G659250 NA other downstream 842813 86160242 ~ 86160923 (-)
G658255 NA other downstream 1996231 85006726 ~ 85007505 (-)
LOC110528632 LOC105007334 other downstream 3046968 83954195 ~ 84332909 (-)
G656671 dag1 other downstream 3387738 83608532 ~ 83615998 (-)
LOC110528687 LOC106583825 other upstream 1245771 88253063 ~ 88345745 (-)
G661128 NA other upstream 1752201 88759493 ~ 88759938 (-)
G661426 LOC106583832 other upstream 2045784 89053076 ~ 89061481 (-)
G661335 NA other upstream 2089755 88831729 ~ 89104274 (-)

Expression

G659824 Expression in all Baseline Samples

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G659824 Expression in each Bioproject

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G659824 Expression in each Sample
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Co-expression Network