Gene
RNA
| Item | Value |
|---|---|
| gene id | G659672 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 87016364 ~ 87017560 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ATR-interacting protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU750248 | True | 232 | lncRNA | 0.55 | 2 | 87016364 | 87017560 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488454 | NA | coding | upstream | 9055 | 86927892 ~ 87007309 (+) |
| LOC110488455 | LOC106583799 | coding | upstream | 11959 | 86985551 ~ 87051602 (+) |
| slc6a11b | slc6a11 | coding | upstream | 610335 | 86344725 ~ 86406029 (+) |
| atp2b2 | LOC106566233 | coding | upstream | 710830 | 86102263 ~ 86305534 (+) |
| LOC110528658 | slc6a1 | coding | upstream | 982803 | 86018075 ~ 86033561 (+) |
| si:dkey-42i9.4 | btg1 | coding | downstream | 36954 | 87054514 ~ 87056155 (+) |
| ippk | ippk | coding | downstream | 48602 | 87066162 ~ 87106788 (+) |
| ecm2 | ecm2 | coding | downstream | 99200 | 87116760 ~ 87156905 (+) |
| aspn | aspn | coding | downstream | 152031 | 87169591 ~ 87198009 (+) |
| ogna | LOC106583805 | coding | downstream | 215392 | 87232952 ~ 87249174 (+) |
| G659668 | NA | non-coding | upstream | 3202 | 87012493 ~ 87013162 (+) |
| G659640 | LOC106583798 | non-coding | upstream | 49290 | 86944798 ~ 86967074 (+) |
| G659623 | NA | non-coding | upstream | 90064 | 86926093 ~ 86926300 (+) |
| G659498 | NA | non-coding | upstream | 250482 | 86763158 ~ 86765882 (+) |
| G659701 | NA | non-coding | downstream | 63794 | 87081354 ~ 87089713 (+) |
| G659709 | NA | non-coding | downstream | 92670 | 87110230 ~ 87114200 (+) |
| G659711 | NA | non-coding | downstream | 97514 | 87115074 ~ 87115355 (+) |
| G659715 | NA | non-coding | downstream | 110346 | 87127906 ~ 87128999 (+) |
| G659722 | NA | non-coding | downstream | 133349 | 87150909 ~ 87151382 (+) |
| G659136 | NA | other | upstream | 494542 | 86521060 ~ 86521822 (+) |
| G659058 | NA | other | upstream | 603779 | 86408702 ~ 86412974 (+) |
| G658887 | NA | other | upstream | 1120215 | 85895826 ~ 85896149 (+) |
| G658885 | NA | other | upstream | 1129243 | 85886592 ~ 85887121 (+) |
| G657481 | NA | other | upstream | 2008866 | 85006479 ~ 85007498 (+) |
| G659706 | NA | other | downstream | 82904 | 87100464 ~ 87102270 (+) |
| nisch | LOC106583810 | other | downstream | 367339 | 87346077 ~ 87387283 (+) |
| G660790 | NA | other | downstream | 1405204 | 88422764 ~ 88427927 (+) |
| G660853 | NA | other | downstream | 1604753 | 88622313 ~ 88689342 (+) |
| G660886 | NA | other | downstream | 1674334 | 88691894 ~ 88694076 (+) |
