Gene
RNA
| Item | Value |
|---|---|
| gene id | G659907 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 87097875 ~ 87102174 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| extensin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU750574 | False | 262 | lncRNA | 0.55 | 2 | 87097875 | 87102123 |
| TU750572 | False | 262 | lncRNA | 0.55 | 2 | 87100464 | 87102123 |
| TU750575 | True | 313 | lncRNA | 0.56 | 2 | 87100464 | 87102174 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965396 | NA | coding | downstream | 38011 | 87058268 ~ 87059864 (-) |
| atrip | atrip | coding | downstream | 44001 | 87007438 ~ 87053874 (-) |
| LOC110528663 | LOC106583798 | coding | downstream | 130883 | 86944797 ~ 86966992 (-) |
| poc1a | poc1a | coding | downstream | 277362 | 86723768 ~ 86820513 (-) |
| LOC118965395 | NA | coding | downstream | 382699 | 86714279 ~ 86715176 (-) |
| LOC110528667 | cenpp | coding | upstream | 11930 | 87114104 ~ 87293966 (-) |
| wu:fb55g09 | cl012 | coding | upstream | 239015 | 87341189 ~ 87342665 (-) |
| si:dkeyp-87e7.4 | LOC106583812 | coding | upstream | 308006 | 87410180 ~ 87425169 (-) |
| LOC110528674 | pdhb | coding | upstream | 375215 | 87477389 ~ 87494213 (-) |
| pxk | pxk | coding | upstream | 393212 | 87495386 ~ 87555025 (-) |
| G659881 | NA | non-coding | downstream | 64220 | 87032802 ~ 87033655 (-) |
| G659827 | NA | non-coding | downstream | 88511 | 86928258 ~ 87009364 (-) |
| G659846 | NA | non-coding | downstream | 150656 | 86946470 ~ 86947219 (-) |
| G659841 | NA | non-coding | downstream | 153363 | 86941822 ~ 86944512 (-) |
| G659619 | NA | non-coding | downstream | 209363 | 86888026 ~ 86888512 (-) |
| G659925 | NA | non-coding | upstream | 26121 | 87128295 ~ 87128815 (-) |
| G659930 | NA | non-coding | upstream | 44515 | 87146689 ~ 87147130 (-) |
| G659936 | NA | non-coding | upstream | 56223 | 87158397 ~ 87159244 (-) |
| G659942 | NA | non-coding | upstream | 66338 | 87168512 ~ 87168790 (-) |
| G659944 | NA | non-coding | upstream | 67955 | 87170129 ~ 87170767 (-) |
| G659824 | NA | other | downstream | 90583 | 87003736 ~ 87007292 (-) |
| G659543 | NA | other | downstream | 464019 | 86632407 ~ 86633856 (-) |
| G659250 | NA | other | downstream | 936952 | 86160242 ~ 86160923 (-) |
| G658255 | NA | other | downstream | 2090370 | 85006726 ~ 85007505 (-) |
| LOC110528632 | LOC105007334 | other | downstream | 3141107 | 83954195 ~ 84332909 (-) |
| LOC110528687 | LOC106583825 | other | upstream | 1150889 | 88253063 ~ 88345745 (-) |
| G661128 | NA | other | upstream | 1657319 | 88759493 ~ 88759938 (-) |
| G661426 | LOC106583832 | other | upstream | 1950902 | 89053076 ~ 89061481 (-) |
| G661335 | NA | other | upstream | 1994873 | 88831729 ~ 89104274 (-) |
