G659707



Basic Information


Item Value
gene id G659707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87158416 ~ 87159138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU750290
actttcgcaaggcactgtatatatagtgcactacttttggccaggaccggtagggaatagagtgccatttgggatgtagatcTGGTGATCGAGGGGTACAGATGAGGATGTAACATGTCTAGAGATGCCCTTTCAGTCCTactctgtgatttatttttgtTGGTCCCCAGTTTGAGACGTTGCTTCAGATTTCGTTTGCTTGACGTTCACCGACTGAGAGAATATAGATGGGATCAACTAAACACAGAAATATAAATAGAACCATCTTTACcaagtcaaattgccagggttagaggttccaagcccgTTCTATAGATTGTATTTCTATGTCAATTCTATGTCAAGCAGCGGGTCAGGATCTACAATAAGGAGATATACCTCTGATGTATATAGGGATATGTATAttgggataataataataataatcagtatGTTTTATATATGATATTGCTTTGCCCTCAACTGACTTATTTCACGAGTCATTCTATAAAGAAACTATACTGTAGAATGGAAACTTGTACAATAGTTTTCAGTGTTTTTAAATCTGTCTGCAACACCACGTGTACATGGCTGGCTAAGATGTAAAAGTGGGGATTGTGAATTTATTAAAAGCTACATTTGAGAATTGCATTATCGACAAGTTCATACAAAGTGcaagtacattttttttgttcataCCTGTACAAACACACGATGTCAGAA

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU750290 True 702 lncRNA 0.37 2 87158416 87159138
Loading

Neighbor


gene id symbol gene type direction distance location
ecm2 ecm2 coding upstream 1511 87116760 ~ 87156905 (+)
ippk ippk coding upstream 51628 87066162 ~ 87106788 (+)
si:dkey-42i9.4 btg1 coding upstream 102261 87054514 ~ 87056155 (+)
LOC110488454 NA coding upstream 151107 86927892 ~ 87007309 (+)
LOC110488455 LOC106583799 coding upstream 154011 86985551 ~ 87051602 (+)
aspn aspn coding downstream 10453 87169591 ~ 87198009 (+)
ogna LOC106583805 coding downstream 73814 87232952 ~ 87249174 (+)
nol8 nol8 coding downstream 134826 87293964 ~ 87315116 (+)
nisch LOC106583810 coding downstream 186939 87346077 ~ 87387283 (+)
LOC110528678 dnase1l3 coding downstream 487879 87647017 ~ 87658838 (+)
G659722 NA non-coding upstream 7034 87150909 ~ 87151382 (+)
G659715 NA non-coding upstream 29417 87127906 ~ 87128999 (+)
G659711 NA non-coding upstream 43061 87115074 ~ 87115355 (+)
G659709 NA non-coding upstream 44216 87110230 ~ 87114200 (+)
G659701 NA non-coding upstream 68703 87081354 ~ 87089713 (+)
G659760 NA non-coding downstream 231224 87390362 ~ 87390747 (+)
G659802 NA non-coding downstream 251058 87410196 ~ 87410990 (+)
G660087 NA non-coding downstream 317217 87476355 ~ 87477630 (+)
G660089 NA non-coding downstream 333687 87492825 ~ 87494292 (+)
G659706 NA other upstream 56146 87100464 ~ 87102270 (+)
G659136 NA other upstream 636594 86521060 ~ 86521822 (+)
G659058 NA other upstream 745831 86408702 ~ 86412974 (+)
G658887 NA other upstream 1262267 85895826 ~ 85896149 (+)
G658885 NA other upstream 1271295 85886592 ~ 85887121 (+)
G660790 NA other downstream 1263626 88422764 ~ 88427927 (+)
G660853 NA other downstream 1463175 88622313 ~ 88689342 (+)
G660886 NA other downstream 1532756 88691894 ~ 88694076 (+)
G661162 NA other downstream 1657947 88817085 ~ 88817655 (+)

Expression


G659707 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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G659707 Expression in each Bioproject

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G659707 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network