G660065



Basic Information


Item Value
gene id G660065
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87392943 ~ 87393257 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU750785
ACTACTGGAAGTCGCTGAGAATGAGAGCGTCTGCTAATCGGTTGGTGCTCTTGAGGTTGGAGGCTGTCAAAGGTAAGCCGAGGTGACATTCTAAAAATAGTTGTTCCACCAAATTCATAAAGTACACCAGAAACAGACCGTTTCCCAATAGCCATTTTAGTCCTAGAGTAATGGGTCCTAATAGAGGTAACAGTCTAACTGGCTGAGTCCCAGTACCGTACTTGAGTCCTGTATGTTTTTGGAAGAACGTTACTTTTTTGGGGGAAATCCTGTATACTTGAAATGCCCGGATGTCTCACTCATTTTGTCTTTGCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU750785 True 315 lncRNA 0.43 1 87392943 87393257

Neighbor


gene id symbol gene type direction distance location
wu:fb55g09 cl012 coding downstream 50278 87341189 ~ 87342665 (-)
LOC110528667 cenpp coding downstream 98977 87114104 ~ 87293966 (-)
LOC118965396 NA coding downstream 333079 87058268 ~ 87059864 (-)
atrip atrip coding downstream 339069 87007438 ~ 87053874 (-)
LOC110528663 LOC106583798 coding downstream 425951 86944797 ~ 86966992 (-)
si:dkeyp-87e7.4 LOC106583812 coding upstream 16923 87410180 ~ 87425169 (-)
LOC110528674 pdhb coding upstream 84132 87477389 ~ 87494213 (-)
pxk pxk coding upstream 102129 87495386 ~ 87555025 (-)
rpp14 rpp14 coding upstream 162033 87555290 ~ 87565881 (-)
LOC110528675 rpp14 coding upstream 162039 87555296 ~ 87556594 (-)
G660067 NA non-coding downstream 2034 87390400 ~ 87390909 (-)
G660066 NA non-coding downstream 3060 87389590 ~ 87389883 (-)
G660054 NA non-coding downstream 26957 87365538 ~ 87365986 (-)
G660031 NA non-coding downstream 66220 87326101 ~ 87326723 (-)
G660022 NA non-coding downstream 79928 87312481 ~ 87313015 (-)
G660070 NA non-coding upstream 719 87393976 ~ 87394226 (-)
G660072 NA non-coding upstream 14556 87407813 ~ 87408037 (-)
G660081 NA non-coding upstream 35145 87428402 ~ 87428640 (-)
G660396 NA non-coding upstream 101073 87494330 ~ 87573682 (-)
G659824 NA other downstream 385651 87003736 ~ 87007292 (-)
G659543 NA other downstream 759087 86632407 ~ 86633856 (-)
G659250 NA other downstream 1232020 86160242 ~ 86160923 (-)
G658255 NA other downstream 2385438 85006726 ~ 85007505 (-)
LOC110528687 LOC106583825 other upstream 859806 88253063 ~ 88345745 (-)
G661128 NA other upstream 1366236 88759493 ~ 88759938 (-)
G661426 LOC106583832 other upstream 1659819 89053076 ~ 89061481 (-)
G661335 NA other upstream 1703790 88831729 ~ 89104274 (-)
G661773 LOC106583842 other upstream 2064894 89458151 ~ 89459700 (-)

Expression



Co-expression Network