G660397


Basic Information

Item Value
gene id G660397
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87501415 ~ 87503211 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751190
cctaggttgttgctgtaaatgagaatgtgttcagtcaacttatctggtaaaataaggttttggggggaaaaaaatagcAATTTTCAGGTTTTCAAGCCAatttcagtcaaaactgtaactaagccTCTCAGGAACATTCTATTTTTttcggtaagcaactccagtgtagagttggccttgtgttttaggttattgtcgtgctgaaaggtgaattcctctcccagtgtctggtggaaagcagactgaaccagcttgtcctctaggattttttgtgcttagctccattccctttctttttatttaaaaaaactccccagtccttaacgatgaccagcatacccataacacgatgcagccatgcttgaaaatatgaagtggtactcagtgatgtgttttattagatttgccccaaacataatgattTGTCTTCAGGACATAAAGGACATTTCTTCGCCAAATATTTtgctgttttactttagtgccttattgcaaacaggatgcatgttctggaatatttttattctgtacaggtttcctccttttcactctgtcatttaggttagtattgtggagtaactacaatgttgttgatccctcctcagttttctcctatcacagccattaaacgctGTAACtggtttaaagtcaccattggcctcatggtgaaatccctgagtggtttccttcctctccggcaactgagttaggaaggacgtctgtatctttgtagtgactgggtgtattgatacaccatccatagtgtaattaataacttctaTGGTAGATACCAGACCCTCAGGTTCATATACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCATAGACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCAGACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCAGACTATAACTCTATGGTAAATACCAGACCCTCAGGTTCacacagactataactctatggTAGATACCAGACCCTCAGGTTCATATACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCACATAGACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCAGACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCATATACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCAGACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCAGACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCacacagactataactctatggTAGATACCAGACCCTCAGGTTCAGACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCATAGACTATAACTCTATGGTAGATACCAGACCCTCAGGTTCacacagactataactctatggTAGATACCAGACCCTCAGGTTCacacagactataactctatggTAGATACCAGACCCTCAGGTTCacacagactataactctatggTAGATACCAGACCCTCAGGTTCATAGTCTATAACTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751190 True 1514 lncRNA 0.41 2 87501415 87503211

Neighbor

gene id symbol gene type direction distance location
LOC110528674 pdhb coding downstream 7202 87477389 ~ 87494213 (-)
si:dkeyp-87e7.4 LOC106583812 coding downstream 78702 87410180 ~ 87425169 (-)
wu:fb55g09 cl012 coding downstream 158750 87341189 ~ 87342665 (-)
LOC110528667 cenpp coding downstream 207449 87114104 ~ 87293966 (-)
LOC118965396 NA coding downstream 441551 87058268 ~ 87059864 (-)
rpp14 rpp14 coding upstream 52079 87555290 ~ 87565881 (-)
LOC110528675 rpp14 coding upstream 52085 87555296 ~ 87556594 (-)
abhd6a abhd6 coding upstream 64584 87567795 ~ 87603202 (-)
LOC110528679 flnb coding upstream 181350 87684561 ~ 87797999 (-)
slmapa slmap coding upstream 313820 87814241 ~ 87954027 (-)
G660081 NA non-coding downstream 72775 87428402 ~ 87428640 (-)
G660072 NA non-coding downstream 93378 87407813 ~ 87408037 (-)
G660070 NA non-coding downstream 107189 87393976 ~ 87394226 (-)
G660065 NA non-coding downstream 108158 87392943 ~ 87393257 (-)
G660406 NA non-coding upstream 5311 87508522 ~ 87509362 (-)
G660435 NA non-coding upstream 86225 87589436 ~ 87589957 (-)
G660449 NA non-coding upstream 131203 87634414 ~ 87635664 (-)
G660460 NA non-coding upstream 155371 87658582 ~ 87661413 (-)
G660464 NA non-coding upstream 161669 87664880 ~ 87665705 (-)
G659824 NA other downstream 494123 87003736 ~ 87007292 (-)
G659543 NA other downstream 867559 86632407 ~ 86633856 (-)
G659250 NA other downstream 1340492 86160242 ~ 86160923 (-)
G658255 NA other downstream 2493910 85006726 ~ 85007505 (-)
LOC110528687 LOC106583825 other upstream 749852 88253063 ~ 88345745 (-)
G661128 NA other upstream 1256282 88759493 ~ 88759938 (-)
G661426 LOC106583832 other upstream 1549865 89053076 ~ 89061481 (-)
G661335 NA other upstream 1593836 88831729 ~ 89104274 (-)
G661773 LOC106583842 other upstream 1954940 89458151 ~ 89459700 (-)

Expression


Co-expression Network