G660169


Basic Information

Item Value
gene id G660169
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87625437 ~ 87631250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU750919
tgtgctaaactgttcatgccagataccatcacgtctacgctgtgctaaactgttcatgtcagataccatcacatcaacgctgtgctaaactgttcatgtcagataccatcaacactgtgctaaactgttcatgtcagataccatcacatcaacgctgtgctaaactgttcatgtcagataccatcaacactgtgctaaactgttcatgtcagataccatcacatcaacgctgtgctaaactgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU750919 True 244 lncRNA 0.42 3 87625437 87631250

Neighbor

gene id symbol gene type direction distance location
nisch LOC106583810 coding upstream 240114 87346077 ~ 87387283 (+)
nol8 nol8 coding upstream 310321 87293964 ~ 87315116 (+)
ogna LOC106583805 coding upstream 376263 87232952 ~ 87249174 (+)
aspn aspn coding upstream 427428 87169591 ~ 87198009 (+)
ecm2 ecm2 coding upstream 468532 87116760 ~ 87156905 (+)
LOC110528678 dnase1l3 coding downstream 15767 87647017 ~ 87658838 (+)
LOC110528683 slmap coding downstream 320179 87951429 ~ 87953496 (+)
dennd6aa dennd6a coding downstream 335319 87966569 ~ 88011485 (+)
il10 il10 coding downstream 422861 88054111 ~ 88058818 (+)
LOC110528686 NA coding downstream 489619 88120869 ~ 88127498 (+)
G660133 NA non-coding upstream 55908 87567812 ~ 87569529 (+)
G660128 NA non-coding upstream 67087 87557609 ~ 87558350 (+)
G660102 NA non-coding upstream 114748 87510220 ~ 87510689 (+)
G660096 NA non-coding upstream 126886 87495139 ~ 87498551 (+)
G660089 NA non-coding upstream 131145 87492825 ~ 87494292 (+)
G660175 NA non-coding downstream 4574 87635824 ~ 87638222 (+)
G660193 NA non-coding downstream 42216 87673466 ~ 87673723 (+)
G660196 NA non-coding downstream 53320 87684570 ~ 87686074 (+)
G660202 NA non-coding downstream 55205 87686455 ~ 87687178 (+)
G660205 NA non-coding downstream 61980 87693230 ~ 87693969 (+)
G659706 NA other upstream 523167 87100464 ~ 87102270 (+)
G659136 NA other upstream 1103615 86521060 ~ 86521822 (+)
G659058 NA other upstream 1212852 86408702 ~ 86412974 (+)
G658887 NA other upstream 1729288 85895826 ~ 85896149 (+)
G660790 NA other downstream 791514 88422764 ~ 88427927 (+)
G660853 NA other downstream 991063 88622313 ~ 88689342 (+)
G660886 NA other downstream 1060644 88691894 ~ 88694076 (+)
G661162 NA other downstream 1185835 88817085 ~ 88817655 (+)
G661172 NA other downstream 1341734 88972984 ~ 88975830 (+)

Expression


Co-expression Network