G660449


Basic Information

Item Value
gene id G660449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87634414 ~ 87635664 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751251
agcgtagacgtgatggtatctgacatgaacagtttagcacagcgtagacgtgatggtatctgacatgaacagtttagcacagcgttgatgtgatggtatctgacatgaatcaaattcaaatcaaatcaaatttattttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgaagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccgggtggagattataaaaaaacatggtcaagatgttcaaatgttcataaatgaccagcatggtcgaataataataaggcagaatagttgaaactggagcagcagcacagtcaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagagagaaggagagaattagagaatgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggcccactccgaggacacccccggacagggccaaacaggaaggatataaccccacccactttgccaaagcacagcccccacaccactagagggatatcttcaaccaccaacttaccatcctgagacaaggctgagtatagcccacaaagacctccgccacggcacaacttaagggggggggggggagcgccaacccagacaggatgaccacatcagtgactcaacccactcaggtgacgcacctcctccagggacggcatgagagagccccagtaaagccagtgactcagcccctgtaatagggttagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751251 True 999 lncRNA 0.50 2 87634414 87635664

Neighbor

gene id symbol gene type direction distance location
abhd6a abhd6 coding downstream 31212 87567795 ~ 87603202 (-)
rpp14 rpp14 coding downstream 68533 87555290 ~ 87565881 (-)
LOC110528675 rpp14 coding downstream 77820 87555296 ~ 87556594 (-)
pxk pxk coding downstream 79389 87495386 ~ 87555025 (-)
LOC110528674 pdhb coding downstream 140201 87477389 ~ 87494213 (-)
LOC110528679 flnb coding upstream 48897 87684561 ~ 87797999 (-)
slmapa slmap coding upstream 181367 87814241 ~ 87954027 (-)
pde12 pde12 coding upstream 385145 88020809 ~ 88024085 (-)
LOC110528685 LOC106583822 coding upstream 447154 88082818 ~ 88121630 (-)
LOC110528687 LOC106583825 coding upstream 618446 88253063 ~ 88345745 (-)
G660435 NA non-coding downstream 44457 87589436 ~ 87589957 (-)
G660396 NA non-coding downstream 60732 87494330 ~ 87573682 (-)
G660406 NA non-coding downstream 125052 87508522 ~ 87509362 (-)
G660397 NA non-coding downstream 131203 87501415 ~ 87503211 (-)
G660081 NA non-coding downstream 205774 87428402 ~ 87428640 (-)
G660460 NA non-coding upstream 22918 87658582 ~ 87661413 (-)
G660464 NA non-coding upstream 29216 87664880 ~ 87665705 (-)
G660476 NA non-coding upstream 72931 87708595 ~ 87708984 (-)
G660439 NA non-coding upstream 104971 87740635 ~ 87741105 (-)
G660516 NA non-coding upstream 167334 87802998 ~ 87803218 (-)
LOC110528667 cenpp other downstream 340659 87114104 ~ 87293966 (-)
G659824 NA other downstream 627122 87003736 ~ 87007292 (-)
G659543 NA other downstream 1000558 86632407 ~ 86633856 (-)
G659250 NA other downstream 1473491 86160242 ~ 86160923 (-)
G658255 NA other downstream 2626909 85006726 ~ 85007505 (-)
G661128 NA other upstream 1123829 88759493 ~ 88759938 (-)
G661426 LOC106583832 other upstream 1417412 89053076 ~ 89061481 (-)
G661335 NA other upstream 1461383 88831729 ~ 89104274 (-)
G661773 LOC106583842 other upstream 1822487 89458151 ~ 89459700 (-)

Expression


Co-expression Network