G660464


Basic Information

Item Value
gene id G660464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87664880 ~ 87665705 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751275
aaacagacttcttctctcagggacggggagagaaacagggctgcccaataagtccaacactatttaacatctacattaatgaattaacaacaacaaacagacttcttctctcagggacgtggagtgaaacagggctgcccaataagtccaacactatttaacatctacattaatgaattaacaacaagcaaacagacttcttctctcagggacagCCGAATATGtgtcctgccacaacctgagggacagccagtgaaaagtgcaaagtaatgtggataatatttcccatcttgttttgttttgtctttcataccaggtcatgtgtcttctcagtcatgttgagactggtctactaccaggtcatgtgtcttctcagtcatgttgagactggtctactaccaggtcatgtgtcttctcagtcatgttgacactggtctactaccaggtcatgtgtcttctcagtcatgttgacactggtctactaccaggtcatgtgtcttctcagtcatgttgacactggtctactaccaggtcatgtgtcttctcagtcgtgttgacactggtctactaccaggtcatgtgtcttctcagtcgtgttgacactggtctactaccaggtcatgtgtcttctcagtcatgttgacactggtctactaccaggtcatgtgtcttctcagtcgtgttgacactggtccactaccaggtcatgtgtcttctcagtcatgttgacactggtctac

Function

NR:

description
eukaryotic translation initiation factor 4 gamma 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751275 True 740 lncRNA 0.45 2 87664880 87665705

Neighbor

gene id symbol gene type direction distance location
abhd6a abhd6 coding downstream 61678 87567795 ~ 87603202 (-)
rpp14 rpp14 coding downstream 98999 87555290 ~ 87565881 (-)
LOC110528675 rpp14 coding downstream 108286 87555296 ~ 87556594 (-)
pxk pxk coding downstream 109855 87495386 ~ 87555025 (-)
LOC110528674 pdhb coding downstream 170667 87477389 ~ 87494213 (-)
LOC110528679 flnb coding upstream 18856 87684561 ~ 87797999 (-)
slmapa slmap coding upstream 151326 87814241 ~ 87954027 (-)
pde12 pde12 coding upstream 355104 88020809 ~ 88024085 (-)
LOC110528685 LOC106583822 coding upstream 417113 88082818 ~ 88121630 (-)
LOC110528687 LOC106583825 coding upstream 588405 88253063 ~ 88345745 (-)
G660460 NA non-coding downstream 3467 87658582 ~ 87661413 (-)
G660449 NA non-coding downstream 29216 87634414 ~ 87635664 (-)
G660435 NA non-coding downstream 74923 87589436 ~ 87589957 (-)
G660396 NA non-coding downstream 91198 87494330 ~ 87573682 (-)
G660476 NA non-coding upstream 42890 87708595 ~ 87708984 (-)
G660439 NA non-coding upstream 74930 87740635 ~ 87741105 (-)
G660516 NA non-coding upstream 137293 87802998 ~ 87803218 (-)
G660529 NA non-coding upstream 192107 87857812 ~ 87858713 (-)
LOC110528667 cenpp other downstream 371125 87114104 ~ 87293966 (-)
G659824 NA other downstream 657588 87003736 ~ 87007292 (-)
G659543 NA other downstream 1031024 86632407 ~ 86633856 (-)
G659250 NA other downstream 1503957 86160242 ~ 86160923 (-)
G658255 NA other downstream 2657375 85006726 ~ 85007505 (-)
G661128 NA other upstream 1093788 88759493 ~ 88759938 (-)
G661426 LOC106583832 other upstream 1387371 89053076 ~ 89061481 (-)
G661335 NA other upstream 1431342 88831729 ~ 89104274 (-)
G661773 LOC106583842 other upstream 1792446 89458151 ~ 89459700 (-)

Expression


Co-expression Network