G660196


Basic Information

Item Value
gene id G660196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87684570 ~ 87686074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU750951
AATACATATTTATTCTCAGAAGTTATTGCTGAAGATACAGGTTATAAGGACAGGGATTGGCAAAGTCCTCGAGACGGGattgtttgttgttttggtaAGAGAAGAGTTGACGTACAGATTAAAGGTCAAAATGCTAATTCAAAAGCTGAACAGAAATCAGATTACGACAAAGTCCAACGTTAAGAGAGTAGACTACCATTTAGTTCAGTTGCATCTCTTCTCCTATCGACCTACATGACATAGTTATTAATACGTAAGACTTAGGAACAACAGCTAAATAAAGAACATGTCTGAATATGACAGTACAAAACCCTAGAACATTCCAGCTTCTGCAGAGCGCATTTTTAACCCACCATACATGAAGACAGTCGCAGTCcagtccacacacacaaaaaaaacagtagTTTGTAGAAACAGAACAATTAGGGATTGGTTGAGTAGTGCTCTTGTGCAGCATTCAGCATGGCTGAATCACAGGCGTTTAGGCTGAAAACATAGGATAACATTATAGTGTTGCTGTACAATCACCACAACCATCAGTAGTAAACTAAAACTTAAGTCTTGACTTAATCATTAGGGCTCGGTTAACTTGTTTTGACATATTTAGTTGATAACAATCATTAATTTACTTTAAACTATATTATGAAATATTGTTGAGTGCAAATTGTTCCATTCATAATAATAACTATAGGGTGTATTAAGGGGTTTTGTGTTTAAACAAATATCTGGCTCCTCCCCTCCATGGCCGTCTGGTAGACAGATGGGATAGAGGACCGTCTGGTAGACAGATGGGATAGAGGGGAATAGAGGACAGTAAAGTGTACACTATTCCTCATGCAGTACTGgtcaacgtagtgcactacagagggaatagggtgccatttggagctTCCCCCAGGTCTCTAGGGGACAGTGACATGGAAGGGGGAGCCGGGGACGTGATCTTCGCCCCACTTGACAACCAGGATGTAGTCGCCCTTCTCCTTGAGGATATAGGAGACGTTGTACTGCATGTTACCCATGTGTTTCACCGATACCTCCTCACAGGGGATGTGGGGGCCGTGGACTCCAACCAGCAACATGTT
>TU750952
AATACATATTTATTCTCAGAAGTTATTGCTGAAGATACAGGTTATAAGGACAGGGATTGGCAAAGTCCTCGAGACGGGattgtttgttgttttggtaAGAGAAGAGTTGACGTACAGATTAAAGGTCAAAATGCTAATTCAAAAGCTGAACAGAAATCAGATTACGACAAAGTCCAACGTTAAGAGAGTAGACTACCATTTAGTTCAGTTGCATCTCTTCTCCTATCGACCTACATGACATAGTTATTAATACGTAAGACTTAGGAACAACAGCTAAATAAAGAACATGTCTGAATATGACAGTACAAAACCCTAGAACATTCCAGCTTCTGCAGAGCGCATTTTTAACCCACCATACATGAAGACAGTCGCAGTCcagtccacacacacaaaaaaaacagtagTTTGTAGAAACAGAACAATTAGGGATTGGTTGAGTAGTGCTCTTGTGCAGCATTCAGCATGGCTGAATCACAGGCGTTTAGGCTGAAAACATAGGATAACATTATAGTGTTGCTGTACAATCACCACAACCATCAGTAGTAAACTAAAACTTAAGTCTTGACTTAATCATTAGGGCTCGGTTAACTTGTTTTGACATATTTAGTTGATAACAATCATTAATTTACTTTAAACTATATTATGAAATATTGTTGAGTGCAAATTGTTCCATTCATAATAATAACTATAGGGTGTATTAAGGGGTTTTGTGTTTAAACAAATATCTGGCTCCTCCCCTCCATGGCCGTCTGGTAGACAGATGGGATAGAGGACCGTCTGGTAGACAGATGGGATAGAGGACCGTCTGGTAGACAGATGGGATAGAGGACCGTCTGGTAGACAGATGGGATAGAGGACCGTCTGGTAGACAGATGGGATAGAGGACCGTCTGGTAGACAGATGGGATAGAGGACCGTCTGGTAGACAGATGGGATAGAGGACCGTCTGGTAGACAGATGGGATAGAGGTGAATAGAGGACAGTAAAGTGTACACTATTCCTCATGCAGTACTGgtcaacgtagtgcactacagagggaatagggtgccatttggagctTCCCCCAGGTCTCTAGGGGACAGTGACATGGAAGGGGGAGCCGGGGACGTGATCTTCGCCCCACTTGACAACCAGGATGTAGTCGCCCTTCTCCTTGAGGATATAGGAGACGTTGTACTGCATGTTACCCATGTGTTTCACCGATACCTCCTCACAGGGGATGTGGGGGCCGTGGACTCCAACCAGCAACATGTT

Function

NR:

description
filamin-B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU750951 False 1085 lncRNA 0.42 3 87684570 87686074
TU750952 True 1253 lncRNA 0.43 3 87684570 87686074
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528678 dnase1l3 coding upstream 25732 87647017 ~ 87658838 (+)
nisch LOC106583810 coding upstream 299247 87346077 ~ 87387283 (+)
nol8 nol8 coding upstream 369454 87293964 ~ 87315116 (+)
ogna LOC106583805 coding upstream 435396 87232952 ~ 87249174 (+)
aspn aspn coding upstream 486561 87169591 ~ 87198009 (+)
LOC110528683 slmap coding downstream 265355 87951429 ~ 87953496 (+)
dennd6aa dennd6a coding downstream 280495 87966569 ~ 88011485 (+)
il10 il10 coding downstream 368037 88054111 ~ 88058818 (+)
LOC110528686 NA coding downstream 434795 88120869 ~ 88127498 (+)
LOC110528688 LOC106583827 coding downstream 552853 88238927 ~ 88241064 (+)
G660193 NA non-coding upstream 10847 87673466 ~ 87673723 (+)
G660175 NA non-coding upstream 46348 87635824 ~ 87638222 (+)
G660171 NA non-coding upstream 46877 87629218 ~ 87637693 (+)
G660137 NA non-coding upstream 52191 87574253 ~ 87632379 (+)
G660169 NA non-coding upstream 53320 87625437 ~ 87631250 (+)
G660202 NA non-coding downstream 381 87686455 ~ 87687178 (+)
G660205 NA non-coding downstream 7156 87693230 ~ 87693969 (+)
G660199 flnb non-coding downstream 26263 87712337 ~ 87732792 (+)
G660214 NA non-coding downstream 33088 87719162 ~ 87722011 (+)
G660261 NA non-coding downstream 114390 87800464 ~ 87800679 (+)
G659706 NA other upstream 582300 87100464 ~ 87102270 (+)
G659136 NA other upstream 1162748 86521060 ~ 86521822 (+)
G659058 NA other upstream 1271985 86408702 ~ 86412974 (+)
G658887 NA other upstream 1788421 85895826 ~ 85896149 (+)
G660790 NA other downstream 736690 88422764 ~ 88427927 (+)
G660853 NA other downstream 936239 88622313 ~ 88689342 (+)
G660886 NA other downstream 1005820 88691894 ~ 88694076 (+)
G661162 NA other downstream 1131011 88817085 ~ 88817655 (+)
G661172 NA other downstream 1286910 88972984 ~ 88975830 (+)

Expression

G660196 Expression in all Baseline Samples

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G660196 Expression in each Bioproject

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G660196 Expression in each Sample
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Co-expression Network