G660261


Basic Information

Item Value
gene id G660261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87800464 ~ 87800679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751027
CATTTAACAGTAATCACACTACACACATCATCAGCTCATCCACCTGCTTAGCTAAACCAGAGTAGACAGAGTGACTGCATGGCTAGTCTGGGTCACTCTGCTTCTcttcctgctgtgttctgtagTCCTGAGAGCAGCTTGAGCTATTCATTAAAGTCATGTCTGTGtcagaaatggcaccctagtgCCATAGTctgaagtagtgccctatatagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751027 True 216 lncRNA 0.46 1 87800464 87800679

Neighbor

gene id symbol gene type direction distance location
LOC110528678 dnase1l3 coding upstream 141626 87647017 ~ 87658838 (+)
nisch LOC106583810 coding upstream 415141 87346077 ~ 87387283 (+)
nol8 nol8 coding upstream 485348 87293964 ~ 87315116 (+)
ogna LOC106583805 coding upstream 551290 87232952 ~ 87249174 (+)
aspn aspn coding upstream 602455 87169591 ~ 87198009 (+)
LOC110528683 slmap coding downstream 150750 87951429 ~ 87953496 (+)
dennd6aa dennd6a coding downstream 165890 87966569 ~ 88011485 (+)
il10 il10 coding downstream 253432 88054111 ~ 88058818 (+)
LOC110528686 NA coding downstream 320190 88120869 ~ 88127498 (+)
LOC110528688 LOC106583827 coding downstream 438248 88238927 ~ 88241064 (+)
G660199 flnb non-coding upstream 67672 87712337 ~ 87732792 (+)
G660214 NA non-coding upstream 78453 87719162 ~ 87722011 (+)
G660205 NA non-coding upstream 106495 87693230 ~ 87693969 (+)
G660202 NA non-coding upstream 113286 87686455 ~ 87687178 (+)
G660196 NA non-coding upstream 114390 87684570 ~ 87686074 (+)
G660263 NA non-coding downstream 4732 87805411 ~ 87879902 (+)
G660269 NA non-coding downstream 13568 87814247 ~ 87819095 (+)
G660285 NA non-coding downstream 46282 87846961 ~ 87847344 (+)
G660290 NA non-coding downstream 57133 87857812 ~ 87858739 (+)
G660296 slmap non-coding downstream 74576 87875255 ~ 87943459 (+)
G659706 NA other upstream 698194 87100464 ~ 87102270 (+)
G659136 NA other upstream 1278642 86521060 ~ 86521822 (+)
G659058 NA other upstream 1387879 86408702 ~ 86412974 (+)
G658887 NA other upstream 1904315 85895826 ~ 85896149 (+)
G660790 NA other downstream 622085 88422764 ~ 88427927 (+)
G660853 NA other downstream 821634 88622313 ~ 88689342 (+)
G660886 NA other downstream 891215 88691894 ~ 88694076 (+)
G661162 NA other downstream 1016406 88817085 ~ 88817655 (+)
G661172 NA other downstream 1172305 88972984 ~ 88975830 (+)

Expression


Co-expression Network