G660269



Basic Information


Item Value
gene id G660269
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 87814247 ~ 87819095 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU751036
TGTGACCAATATCACTTAGTATCAACTTTTATTTTGTGTTGTCGAGAATGTatatttacacaaacacacagtgaacaaacaaacaaaaaaaagcagTCCAACATTTAGTTGTTTTGGCTCAAACTCCAGCACACTTTGAAAAGATACAACGCCTGAGgtcaaagtgcagactgtcagctttaaatttgagggtattttcatttaATTCAGCTGAAATTTCTTCACTTTTTGGAcgtggtcccctaaaatgggggattgaaagtattgggacaatctcacttatatgtgtattaacgTAGTCAGAaggtagtatttggtcccattaTTCCTAGCAGGCAACGACGACATCAAGCTGGTGACGCTACATACCGGATGGATGAATTTGCGGTTcgttgagaggttagcatgtcttggggctaTATTTGTGCCTCAACATTTCTCTCATTCagaattcattcaggattatcctaAATCATGGTAGCGTCCACATGAATGTATTAGTATGGAGAAAGAAATTATATtcctatttacaataaaagtgactccaatgacacaatacattatttatcatctcatttctattgggcacaaaaataatgtgaaacacaaccaaaacaaacagctaaTGCTTCCAATGagtgtgtagagtcacaagcttgatgtaatcagtatctgctatgaatatgggaccaaatactaaagtTGATTACTTTAATACACAGTGAAATTTcccccaatacttttggtcctaCTAAAAGGAGGGATATGTACAAAAAGTGatgtcatttctaaacggttcacccgatatggatgacaATACCCTcatattaaagctgacagtctgcactttgacctcatagtcattgtatcatttaaaatcTAAAGTGCCGGAGCAcagaaccaaaacaacaacaagtgTTCCACtgcttttggagctcactgtgtaTCCAAAACACATACTGTGGGTGACATGAGACTGCATTCTTATTTTACACATTCTAGCGATAAACATCACATTTGGAAAGCGTGAAAAAGGGAATTGTTATCGTGTCCTTCAGATGATGATCGATGCGAGGCCTTGTGATGTGAAACACAGTCACGGTGTGATGTCACTGTGTGATGCGTGAATAACACGGTTGTAGTTCAAGGTGTCCCGCTGGCTGGCTGGACTGAttttatcctcctcctccttcctggtGTCTCCTGTATGGTCCAGTCCTGTGTTCAGGTGGTGGTGTCACAGGATAGGGTTTAAATCGGGGGCATTGACATGTATTGACACAGTGAAATACGATGAATAGCTGTTTTGCAAAGCCAGTAAACTCTGTATGATCCTGGTATAGCCACACTGAATCGGGGAGCTTAATGGTGATGCCAGCATTCTGTCTGTTTTAACCAGACTAggcatcaaacacacacaaaagtaaAACCTTAAACTTTCCTTCTTTCTTCATGTTGATTGTTTCCCTGATTCACATTGATCCAGTCTCAAAACACAACGCCCAGGTTAACCTCGGACCTTTCAACCTCTTTATAAACCGCACTGGACTGGTAGTGAACATCACTGTGCTTAGTGGTAGGATAACAAATAATGCCAAACCAACCAGTCTGACATGTTCATAGCTTTCTGCTCCAGATTCAGTCTGGAGGTGAGAGACGGGGAACTCCATGTCACAGACAGGTAAGGCAGCAGATTCATCCTCAGGTGATTTTGGAGTAGTGATCTGTGGTACAGAGGTATTTCTGGCTGGCTGGGAATACAACCATTAACATACTGGTATGGGACTAGAACCCAAAACATACTGTGCGCTTGGGCCTGGGGACTAGAACCCATAAAGTAGAGAGGGCCTAGAACCATAGACATGGGCAGGGTCTGAGACTAGAACCATAGACATGGGCAGGGTCTGGGACTAGAACCATAGACATGGGCAGGGTCTGGGACTAGAACCATAGACATGGGCAGGGTCTGGGACTAGAACCATAGACATGGGCAGGGTCTGGGACTAGAACCATAGACATGGGCAGGGTCTGGGACTAGAACCATAGACATGGGCAGGGTCTGGGACTAGAACCCATAAaatacagagggactagaaccatATGGGCAGGGTTTGGGACTAGAACCATAGACCTGGGCAGGGTTTGGGACTAGAACCCATAAaatacagagggactagaaccatATGGGCAGGGTCTGGGACTAGAACCATAGACATGGGTAAACATGAGGGCACATCCTTTTCAAATCAGGTGAGGCACCACATTTTACTCTTAACACCACTTTGGATATAGTTAGATAAAAATTTTAGACCGATTTGTCTCACGATTTGTCAAATTgtacaaaacaaaaaaatgtctgTCCTTCACATCGGAGTGCTGCTGCAGGCTCTTTGCGtgtcttgaccaatcagattcacAGAAATCGCAGGAAGTGCAGGCCAGGCACAAAGCTCAAGGTGTGCTTTCCACTTTCCTCCAGTATTTATTTAGCAAGCATGATAACACATCACTCTCGACAGAaacaagcaaaaaaaaaaaaacacaaaaaacaacCACTTCCAtaaatgtagtagcctaaacaaCTAAACATCAGCGATCTGACATTAGCGAtctcagtctgatcaactgttgGTTACTGACAGCTGCAGTCTAGCCTACTGTGCCCAGTCACTCTGGCCAGGGTAGGTGAAGCAGTAACATTCTGTATTTATAGCCCGTTTTGTTTCTGAGAACATGTGAATGGGATCAAATTTAGTTTACATTCAAACTTGGGCCGACTAGGCTACCTAGACTGGAATGAATCAATATAAACAAAAGCTGACAAGACTGAGGTACATTTTCATTACGCCTACAGTTGCATAGGGAAAGACCCACACGATGCAAACCTGCATATAGCAAGCTCAGCCCTATGTGAGTCTTATCGTCCAATCATGTTGCCTTCTCTGTGTACACAgtaggaaccccccccccccttctttaaAATATAATTCATACGAACAACTACAAGGTTGCTACAGTTTGACAGATTTTCATACTCCCAAGGCCAGGAGTTGTTCTTCAACCCATTTGACCCGATGGAAAAACtctggtcccatcatagcccatattaaatgttttatttgtatttttttttacaacagatTAATCACGTCATACCGTATAAGGTTCGGAGTTTGCCCTGGGTAGGTTACCATCTGCACATGGGCCAAGAACCCAGAGTTAGCAGGCTAGagtttagagacagacagactacttACTGGTCCAGTCCACTACAGCCTTCAACAACATGGATCAACTGAAGGGGGTTGTGCCCATAATGTCTTCTTGTGGCTAAAACCAGAGGCCAAATAAACTGTGCTCAACTCAACATATCTCCAAAGTTACCAAAACTCATCTAGTATCACATCCGAATAACAAGTTCTGTAGTGTTGTTTTAAACATGATGAATATTTTGTCCATTGttattattcttatttttttttacaatacacAAATAAAACAAGACGGAATAGTTCAGCAGAGATACATGTCGGTATAAACCCAGTTACCTACACACACCAGATGGGTTTCAATAACTTAGTTGTTTAGAAATGGCTTCTAGAAAGTTCAAACCGACTCCTCTGTTAGTTTCAATAGGCACTTAACAACCCCTTGTGCCTCATGAAGGCCGGACGTTCccaaaacagcaccctattccctatatagtgcagtacctTTGCCCAGGGCAACATACAGGGATAAGTATGCTGGTTCGACCATTAGGGATGTAACCTAGCAAATAATCACTTTGATGATTTTGGCTTCAATATTAAACCCATATTTGTAATAGCACATGAACAACCCAACATGGTAAACCAACCACACAGGAAGTCAACTCCTCTAAAACAACCTGGAGCCCAAAGAAATTAAGAAAGGTTTGGTACCCATCAGAACTAAAACAAAGCCTAGTTTAGGCCACTTTAATGATAATAATACAATGACCAATATTCCCATCATCCAACTGATTACAGAAAACAATAACTGCTGATATAGTATTTAATCTATGGTAGAAATGACTAATTGTATTCAtctttcctctcgctctctctctctctatatatatatatatatatacagtttgaCTTTGTACAGTTTAAAGCAGAGGGCCTTTATGTGGGGGAACTACTAGACCAGACGGGAGGTAATCAATTAATGAATTAATACATCTATCAATCAAGGAGACAAAGGGGTAGCAGCCCTGGAGGATCGATCAGGAGGCTATAAGGGCGGGAGGTTGGGGTGTTGAGGGAGGGCAAGGTGGGCAGGAGGTTGGGGTGTGGAGAGAGGGCAAGGTGGGCTGGAGGTTGGGgtgtggagggaggagtggaggccAGGGCAGGCCTggtagacaggtagaggtggTACAGGAGGTGTGGTTATATAGGTCGCTGCCTCCTCAGTTCGAGGTGCTCTTGGAGTTGTGGTAAAGCACCACTGCTGTCACTGCTACCATCACTGCTACCACTGGTATCCAGGGGCTCCAAC

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU751036 True 4524 lncRNA 0.43 2 87814247 87819095

Neighbor


gene id symbol gene type direction distance location
LOC110528678 dnase1l3 coding upstream 155409 87647017 ~ 87658838 (+)
nisch LOC106583810 coding upstream 428924 87346077 ~ 87387283 (+)
nol8 nol8 coding upstream 499131 87293964 ~ 87315116 (+)
ogna LOC106583805 coding upstream 565073 87232952 ~ 87249174 (+)
aspn aspn coding upstream 616238 87169591 ~ 87198009 (+)
LOC110528683 slmap coding downstream 132334 87951429 ~ 87953496 (+)
dennd6aa dennd6a coding downstream 147474 87966569 ~ 88011485 (+)
il10 il10 coding downstream 235016 88054111 ~ 88058818 (+)
LOC110528686 NA coding downstream 301774 88120869 ~ 88127498 (+)
LOC110528688 LOC106583827 coding downstream 419832 88238927 ~ 88241064 (+)
G660261 NA non-coding upstream 13568 87800464 ~ 87800679 (+)
G660199 flnb non-coding upstream 81455 87712337 ~ 87732792 (+)
G660214 NA non-coding upstream 92236 87719162 ~ 87722011 (+)
G660205 NA non-coding upstream 120278 87693230 ~ 87693969 (+)
G660202 NA non-coding upstream 127069 87686455 ~ 87687178 (+)
G660285 NA non-coding downstream 27866 87846961 ~ 87847344 (+)
G660290 NA non-coding downstream 38717 87857812 ~ 87858739 (+)
G660296 slmap non-coding downstream 56160 87875255 ~ 87943459 (+)
G660297 NA non-coding downstream 56908 87876003 ~ 87876639 (+)
G660317 NA non-coding downstream 93529 87912624 ~ 87913727 (+)
G659706 NA other upstream 711977 87100464 ~ 87102270 (+)
G659136 NA other upstream 1292425 86521060 ~ 86521822 (+)
G659058 NA other upstream 1401662 86408702 ~ 86412974 (+)
G658887 NA other upstream 1918098 85895826 ~ 85896149 (+)
G660790 NA other downstream 603669 88422764 ~ 88427927 (+)
G660853 NA other downstream 803218 88622313 ~ 88689342 (+)
G660886 NA other downstream 872799 88691894 ~ 88694076 (+)
G661162 NA other downstream 997990 88817085 ~ 88817655 (+)
G661172 NA other downstream 1153889 88972984 ~ 88975830 (+)

Expression



Co-expression Network