G660321


Basic Information

Item Value
gene id G660321
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88011507 ~ 88014957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751106
caagttggctggatgtcctttgggtggtggaccattcttgatacacgtgtggaaaaacccagcagcgttgcagttcttgacacgaaccaaaggcacttaaatctgtcttgtccattcaccttctgaatgacacacatacacaatccatgtctcaaggcttaaaaatccttctttaaccatgtctccttcccttcatctacacggattttgaaatggatttaacaagtgacatcaataagggatcatatctttcacctggtcagtctgtcatggaaatgttttgtccactcagtgtatagtgGTTGAGGAGGAGACATCGGGGTGGTCTTCATGAGGCACAAAACAGATCGAAACAAGAAGGAACCTAAAGCTAGTGCAATAACAAATGGTTTGCGTTTCAAAACGTTTTGTTACGTTGTGCCTTAATGAATAGCACCCTTGTTGGAggttgatctctgtgtgtgtgtgtgtgtgtgtgggaatagAATAGCAGAGTGCTGTTGCTATTTTAGACCAATAGGATCGAACTTGTATATAATTTGTACTCATTTTTAGAAGAACGTAAGGAAAAAGACCTTCACTAAACCCTCGTCCTTATATTGCAGTACTACTTCTGCTCTAAATGTGTGttctgcatagggaatagggtgccatttgggatgcattcattCTACATGTTTAAAATGGGCAACCGGGTAACTGACGAAAAATAACTGGCTGACACATTGCCTTGTCATATTGATTTGGACCTGATTTTTGTGAGGTTTTACATTATTCATCTGTGTAGGCCCACCACAACCCCCTGTACCACATTATTCATCTGTGTAGGCCCACCACAACCCCCTGTACCACATTATTCATCTGTGTAGGCCCACCACAACCCCCTGTACCACATTATTCATCTGTGTAGGCCCACCACAACCCCCTGTACCACATTATTCATCTGTGTAGGCCCACCACAACCCCCTGTACCACATTATTCATCTGTGTAGGCCCACCACAACCCCCTGTACCACATTATTCATCTGTGTAGGCCCACCACAACCCCTTGTACCTCATTATTCATCTGTGTAGACCCACCACAACCCCCTTGTCCCACATTATTCATCTGTGTAGGCCCACCACATTATTCATCTGTGTAGGCCCACTACATTATTCATCTGTGTAGGCCCACCACATTATTCATCTGTGTAGGCCCACCACATTATTCATCTGTGTAGGCCAACCACAACCCCTTGTACCACATTATTCATCTGTGTAGGCCCACTACATTATTCATCTGTGTAGGCCCACCACATTATTAATCTGTGTAGGCCAACCACAACCCCTTGTACCACATTATTCATCTGTGTAGGCCCACCACAACCCCTTGTACCACATTATTCATCTGTGTAGGCCCACTACATTATTCATCTGTGTAGGCCCACCACATTATTCATCTGTGTAGGCCCACCACAACCCCTTGTACCACATTATTCATCTGTGTAGGCCCACCACATTATTCATCTGTGTAGGCCCACCACATTATTCATCGGTGTAGGCCCACCACAACCCCCTTGTACCACATTATTCATCTGTGTAGGCCCACCACAACCCCTTGTACCACATTATTCATCTGTGTAGGCCCACTACATTATTCATCTGTGTAGGCCCACCACATTATTCATCTGTGTAGGCCCACCACAACCCCTTGTACCACATTATTCATCTGTGTAGGCCCACCACATTATTCATCTGTGTAGGCCCACCACATTATTCATCGGTGTAGGCACACCACAACCCCCTTGTACCACATTATTCATCTGTGTAGGCCCACCACAACCCCTTGTACCACATTATTCATCTGTGTAGGCCTTCACAACCCATACGAACAGTCCTTGTACACCAGGGCTTTCTAGCGGCTAGCTAAACCAGAGTTGGTTTCCTACCGGTCCACTGCCACTGTCTGGATTTCATTTGGCACCCAGCCACTGTCTCTGTCCTCAGTGTCATTGATTTGGTTCACACCAACTGTATTGTCCGAAACACATTTTGCTGATCATAATGGATGTTGATAGCCTGGGTACAGGTCTGtttagctatcattccactccttgtcttTGGCATATGACACGGAGGAGTGGAATGTTGGCTAAACAGACTGGTCCCCAGGCTAGGATGTTGAAACGGTTTAGCCTTCCAGACCCTAACTGTTTGTATTCATGCTGTTTTTATGCTTTGAGTAGAAGTTTTGTTTGGAGTGCATTACGTGTATGGTGTGCTCAACCATCATATGTTGAGTGTAGAGATCATTCTTCCTCTGAACTGTTAAACATATCTACATGTATGCTGAACAACATTACTGCAGAGGAGGTTTTTCCTAACACAGATTTTGCTGTCAGACTTTGGACTACCTATGAGGTTTTTACGTCTTACATTTTGAAAACCGATATTTGATTTGTTGAGTATTTTGATGTTACAGAATACATTATTTTTCTTGATCAGCTTTTATCATAGGGTGTGCCTTAAGGGATGATGGTTAGAAAAAACAGAACCAAAGATGGACTGTTTTTAGGTTAAATATCGAACTGTGACTGTGTAGTAGGCTAATAATAACTTCTGATATCTACAGTAGTGGCTCACTCACTCAGTAACCTGTCATATTCTGATCTGCTTCAAACACCATGGAACACCATCATTCTGTTGGAACCCATCAGAATTCCATTGGAACTGTTGGAACCCATCAGAATTCCGTTGGAACCCATCAGAATTCCGTTGGAACTGTTGGAACCCATCAGAATTCCGTTGGAACTGTCTGTCCTCTGAGGGAATATTTCAGTTAAATTAATATTGGTTGGTACACACCTGTGATGGGTTTCCATATTTTGAAAATACTTATTTTAACAAGATCATTTTGTATAAAGGGCTATTCTCATATTCCATTGATCTAAAAAGTGAAGTTTTGTACATATGTTGAAATACCCAGCCATCACCATTGATGATGATATTCATTATATTACAACCATTATTTTACTAAATATAGATATTACTGACATGGACATACATTTGTAATATCTTCCAATGGGCTGGTTAGATGTTAAAGAACTAGAATAAGGATGATAACATAATATACTGCATCATATTGCTTTGGGGAACTCAGTATTTTTACATTTGCAATGTTTGATCGTTTTTTGTATTGAAGCCTTAATACAATAACTACTGAGGAACCACTATTGATGCCTTTTTAAAGAAGTACTGAGGAACCACTAATGCTAACAGACAATGGCTTTCAGTGAGCGCAAGTATTTTAATGTGAATAAACGGGCCTCTAGGATCTCACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751106 True 3320 lncRNA 0.42 2 88011507 88014957

Neighbor

gene id symbol gene type direction distance location
dennd6aa dennd6a coding upstream 22 87966569 ~ 88011485 (+)
LOC110528683 slmap coding upstream 58011 87951429 ~ 87953496 (+)
LOC110528678 dnase1l3 coding upstream 352669 87647017 ~ 87658838 (+)
nisch LOC106583810 coding upstream 626184 87346077 ~ 87387283 (+)
nol8 nol8 coding upstream 696391 87293964 ~ 87315116 (+)
il10 il10 coding downstream 39154 88054111 ~ 88058818 (+)
LOC110528686 NA coding downstream 105912 88120869 ~ 88127498 (+)
LOC110528688 LOC106583827 coding downstream 223970 88238927 ~ 88241064 (+)
pdrg1 pdrg1 coding downstream 502478 88517435 ~ 88528083 (+)
LOC110528691 LOC106583835 coding downstream 764407 88777804 ~ 88781772 (+)
G660296 slmap non-coding upstream 68048 87875255 ~ 87943459 (+)
G660327 NA non-coding upstream 89628 87921590 ~ 87921879 (+)
G660317 NA non-coding upstream 97780 87912624 ~ 87913727 (+)
G660263 NA non-coding upstream 131605 87805411 ~ 87879902 (+)
G660371 pde12 non-coding downstream 6045 88021002 ~ 88021785 (+)
G660378 NA non-coding downstream 19611 88034568 ~ 88035208 (+)
G660389 NA non-coding downstream 45899 88060856 ~ 88061212 (+)
G660598 NA non-coding downstream 67874 88082831 ~ 88084576 (+)
G660664 NA non-coding downstream 122706 88137663 ~ 88232319 (+)
G659706 NA other upstream 909237 87100464 ~ 87102270 (+)
G659136 NA other upstream 1489685 86521060 ~ 86521822 (+)
G659058 NA other upstream 1598922 86408702 ~ 86412974 (+)
G658887 NA other upstream 2115358 85895826 ~ 85896149 (+)
G660790 NA other downstream 407807 88422764 ~ 88427927 (+)
G660853 NA other downstream 607356 88622313 ~ 88689342 (+)
G660886 NA other downstream 676937 88691894 ~ 88694076 (+)
G661162 NA other downstream 802128 88817085 ~ 88817655 (+)
G661172 NA other downstream 958027 88972984 ~ 88975830 (+)

Expression


Co-expression Network