G660389


Basic Information

Item Value
gene id G660389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88060856 ~ 88061212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751181
GTCTTTGGGTGTTGGGATTCCCAAAGGCATACAGTACAAACTCaccaccctccaacccctctttttacgctactgctactctctgttcatcatatatgcatagtcactttaaccatatctacatgtacatactacctcaatcagcctgactaaccggtgtctgtatgtagcctcgatacttttacagcctctctactgtatatagcctgtctttttactgttgttttatttctttacttacctattgttcaacTAACAccttttttttgcactattggttagagcctgtaagtaagcatttcactgttgtattcagcgaacgtgacaaataaacttttgaTTTGAACTCTGAAACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751181 True 357 lncRNA 0.39 1 88060856 88061212

Neighbor

gene id symbol gene type direction distance location
il10 il10 coding upstream 2038 88054111 ~ 88058818 (+)
dennd6aa dennd6a coding upstream 49371 87966569 ~ 88011485 (+)
LOC110528683 slmap coding upstream 107360 87951429 ~ 87953496 (+)
LOC110528678 dnase1l3 coding upstream 402018 87647017 ~ 87658838 (+)
nisch LOC106583810 coding upstream 675533 87346077 ~ 87387283 (+)
LOC110528686 NA coding downstream 59657 88120869 ~ 88127498 (+)
LOC110528688 LOC106583827 coding downstream 177715 88238927 ~ 88241064 (+)
pdrg1 pdrg1 coding downstream 456223 88517435 ~ 88528083 (+)
LOC110528691 LOC106583835 coding downstream 718152 88777804 ~ 88781772 (+)
cass4 LOC106583834 coding downstream 729558 88790770 ~ 88852155 (+)
G660378 NA non-coding upstream 25648 88034568 ~ 88035208 (+)
G660371 pde12 non-coding upstream 39071 88021002 ~ 88021785 (+)
G660321 NA non-coding upstream 45899 88011507 ~ 88014957 (+)
G660327 NA non-coding upstream 138977 87921590 ~ 87921879 (+)
G660317 NA non-coding upstream 147129 87912624 ~ 87913727 (+)
G660598 NA non-coding downstream 21619 88082831 ~ 88084576 (+)
G660664 NA non-coding downstream 76451 88137663 ~ 88232319 (+)
G660670 NA non-coding downstream 99820 88161032 ~ 88194958 (+)
G660673 NA non-coding downstream 120742 88181954 ~ 88183712 (+)
G660674 NA non-coding downstream 121406 88182618 ~ 88196526 (+)
G659706 NA other upstream 958586 87100464 ~ 87102270 (+)
G659136 NA other upstream 1539034 86521060 ~ 86521822 (+)
G659058 NA other upstream 1648271 86408702 ~ 86412974 (+)
G658887 NA other upstream 2164707 85895826 ~ 85896149 (+)
G660790 NA other downstream 361552 88422764 ~ 88427927 (+)
G660853 NA other downstream 561101 88622313 ~ 88689342 (+)
G660886 NA other downstream 630682 88691894 ~ 88694076 (+)
G661162 NA other downstream 755873 88817085 ~ 88817655 (+)
G661172 NA other downstream 911772 88972984 ~ 88975830 (+)

Expression


Co-expression Network