G660669


Basic Information

Item Value
gene id G660669
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88195594 ~ 88198389 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751615
tctagctgatctgtcatattataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagcagatctagctggtctgtcatattataatagatacagtagatctagctggtctgtcataatataatagagacagttgatctacctggtctgtcatattattatagagacagtagatctagctggtctgtcataatataatagaggcagtagatctacctggtctgtcaatatagtagagactgtagatctagctggtctgtcataatataatagagacagttgatctagctggtctttcatattataatagagacagtagatctagctggtctgtcataatataatagacactgtatatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagactgtagatctagctggtctgtcataatacaataaggacagtagatctaggttgtctgtcataatctaatagagacagagacagtaaatctagctggtctgtcataatagaatagagacagagacagtagatctagctgctctgtcatattataatagagacagtagatctagctgttctgtcataatataatagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751615 True 668 lncRNA 0.35 2 88195594 88198389

Neighbor

gene id symbol gene type direction distance location
LOC110528686 NA coding upstream 68096 88120869 ~ 88127498 (+)
il10 il10 coding upstream 136776 88054111 ~ 88058818 (+)
dennd6aa dennd6a coding upstream 184109 87966569 ~ 88011485 (+)
LOC110528683 slmap coding upstream 242098 87951429 ~ 87953496 (+)
LOC110528678 dnase1l3 coding upstream 536756 87647017 ~ 87658838 (+)
LOC110528688 LOC106583827 coding downstream 40538 88238927 ~ 88241064 (+)
pdrg1 pdrg1 coding downstream 319046 88517435 ~ 88528083 (+)
LOC110528691 LOC106583835 coding downstream 580975 88777804 ~ 88781772 (+)
cass4 LOC106583834 coding downstream 592381 88790770 ~ 88852155 (+)
LOC110510506 LOC106583833 coding downstream 654707 88853096 ~ 88974945 (+)
G660670 NA non-coding upstream 636 88161032 ~ 88194958 (+)
G660673 NA non-coding upstream 11882 88181954 ~ 88183712 (+)
G660598 NA non-coding upstream 111018 88082831 ~ 88084576 (+)
G660389 NA non-coding upstream 134382 88060856 ~ 88061212 (+)
G660378 NA non-coding upstream 160386 88034568 ~ 88035208 (+)
G660699 NA non-coding downstream 44854 88243243 ~ 88243708 (+)
G660702 NA non-coding downstream 49151 88247540 ~ 88248082 (+)
G660703 NA non-coding downstream 52342 88250731 ~ 88251387 (+)
G660705 NA non-coding downstream 54695 88253084 ~ 88255908 (+)
G660711 NA non-coding downstream 67099 88265488 ~ 88266023 (+)
nisch LOC106583810 other upstream 808311 87346077 ~ 87387283 (+)
G659706 NA other upstream 1093324 87100464 ~ 87102270 (+)
G659136 NA other upstream 1673772 86521060 ~ 86521822 (+)
G659058 NA other upstream 1783009 86408702 ~ 86412974 (+)
G658887 NA other upstream 2299445 85895826 ~ 85896149 (+)
G660790 NA other downstream 224375 88422764 ~ 88427927 (+)
G660853 NA other downstream 423924 88622313 ~ 88689342 (+)
G660886 NA other downstream 493505 88691894 ~ 88694076 (+)
G661162 NA other downstream 618696 88817085 ~ 88817655 (+)
G661172 NA other downstream 774595 88972984 ~ 88975830 (+)

Expression


Co-expression Network