G660699


Basic Information

Item Value
gene id G660699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88243243 ~ 88243708 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751705
GGTTATCCTACACTTTAATCAGACCAAACGGTCAGACTTGACGGGGTCTGGGTTGGAATTGTGGCGTATCTCCACCCggcaatgaatgaatgaaatgatgattccttgctgtccccagtccacctggccgtgctgatgctccagttccaactgttctgcctgtgattattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccactgtgcttctacacctgcattgcttgctgtttgtgggttttaggctgggtttctgtacagcactttgagatagcagctgatgtacgaagggctatataaatacatttgatttgattatatctATTTTACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751705 True 466 lncRNA 0.46 1 88243243 88243708

Neighbor

gene id symbol gene type direction distance location
LOC110528688 LOC106583827 coding upstream 2179 88238927 ~ 88241064 (+)
LOC110528686 NA coding upstream 115745 88120869 ~ 88127498 (+)
il10 il10 coding upstream 184425 88054111 ~ 88058818 (+)
dennd6aa dennd6a coding upstream 231758 87966569 ~ 88011485 (+)
LOC110528683 slmap coding upstream 289747 87951429 ~ 87953496 (+)
pdrg1 pdrg1 coding downstream 273727 88517435 ~ 88528083 (+)
LOC110528691 LOC106583835 coding downstream 535656 88777804 ~ 88781772 (+)
cass4 LOC106583834 coding downstream 547062 88790770 ~ 88852155 (+)
LOC110510506 LOC106583833 coding downstream 609388 88853096 ~ 88974945 (+)
LOC118965328 NA coding downstream 730994 88974702 ~ 89002957 (+)
G660664 NA non-coding upstream 10924 88137663 ~ 88232319 (+)
G660665 NA non-coding upstream 42048 88194326 ~ 88201195 (+)
G660669 NA non-coding upstream 44854 88195594 ~ 88198389 (+)
G660674 NA non-coding upstream 46717 88182618 ~ 88196526 (+)
G660670 NA non-coding upstream 48285 88161032 ~ 88194958 (+)
G660702 NA non-coding downstream 3832 88247540 ~ 88248082 (+)
G660703 NA non-coding downstream 7023 88250731 ~ 88251387 (+)
G660705 NA non-coding downstream 9376 88253084 ~ 88255908 (+)
G660711 NA non-coding downstream 21780 88265488 ~ 88266023 (+)
G660717 NA non-coding downstream 37092 88280800 ~ 88281358 (+)
nisch LOC106583810 other upstream 855960 87346077 ~ 87387283 (+)
G659706 NA other upstream 1140973 87100464 ~ 87102270 (+)
G659136 NA other upstream 1721421 86521060 ~ 86521822 (+)
G659058 NA other upstream 1830658 86408702 ~ 86412974 (+)
G658887 NA other upstream 2347094 85895826 ~ 85896149 (+)
G660790 NA other downstream 179056 88422764 ~ 88427927 (+)
G660853 NA other downstream 378605 88622313 ~ 88689342 (+)
G660886 NA other downstream 448186 88691894 ~ 88694076 (+)
G661162 NA other downstream 573377 88817085 ~ 88817655 (+)
G661172 NA other downstream 729276 88972984 ~ 88975830 (+)

Expression


Co-expression Network