G660702


Basic Information

Item Value
gene id G660702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88247540 ~ 88248082 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751708
taatttgtgttcaatgggACTCATTTATAATTTCCATACAATACTGTAAAAACCATCAAATTTGTCTTTCCAATTTGTTCAGCTCAAAGCAAGAAACAtcctcagatgacctggcctccacaatcacccgacctcaacccaattgagatggtttgggaagagttggaccgcagagtgaaggaaaatcagccaacaagtgctcagcatatgtgggaactccttcaagactgttggaaaagcattcctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaagtgtggcaactttgaagaatctcaaatgtaaaatataattttgatttgttaaacacttttttggttactacatgattccatatgtgttatttcatagttttgatgtcttcactgttattctacaatgttattCTACAAACAACTAAACCTTTGGCTCAACCCCACTATCCCCTTTGTAGTCAAGGTTCTACATTTTCAAAGTTACCAAATTATTTGTTACTGCAGTATTTCTCAATATTAATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751708 True 543 lncRNA 0.37 1 88247540 88248082

Neighbor

gene id symbol gene type direction distance location
LOC110528688 LOC106583827 coding upstream 6476 88238927 ~ 88241064 (+)
LOC110528686 NA coding upstream 120042 88120869 ~ 88127498 (+)
il10 il10 coding upstream 188722 88054111 ~ 88058818 (+)
dennd6aa dennd6a coding upstream 236055 87966569 ~ 88011485 (+)
LOC110528683 slmap coding upstream 294044 87951429 ~ 87953496 (+)
pdrg1 pdrg1 coding downstream 269353 88517435 ~ 88528083 (+)
LOC110528691 LOC106583835 coding downstream 531282 88777804 ~ 88781772 (+)
cass4 LOC106583834 coding downstream 542688 88790770 ~ 88852155 (+)
LOC110510506 LOC106583833 coding downstream 605014 88853096 ~ 88974945 (+)
LOC118965328 NA coding downstream 726620 88974702 ~ 89002957 (+)
G660699 NA non-coding upstream 3832 88243243 ~ 88243708 (+)
G660664 NA non-coding upstream 15221 88137663 ~ 88232319 (+)
G660665 NA non-coding upstream 46345 88194326 ~ 88201195 (+)
G660669 NA non-coding upstream 49151 88195594 ~ 88198389 (+)
G660674 NA non-coding upstream 51014 88182618 ~ 88196526 (+)
G660703 NA non-coding downstream 2649 88250731 ~ 88251387 (+)
G660705 NA non-coding downstream 5002 88253084 ~ 88255908 (+)
G660711 NA non-coding downstream 17406 88265488 ~ 88266023 (+)
G660717 NA non-coding downstream 32718 88280800 ~ 88281358 (+)
G660721 NA non-coding downstream 43477 88291559 ~ 88292051 (+)
nisch LOC106583810 other upstream 860257 87346077 ~ 87387283 (+)
G659706 NA other upstream 1145270 87100464 ~ 87102270 (+)
G659136 NA other upstream 1725718 86521060 ~ 86521822 (+)
G659058 NA other upstream 1834955 86408702 ~ 86412974 (+)
G658887 NA other upstream 2351391 85895826 ~ 85896149 (+)
G660790 NA other downstream 174682 88422764 ~ 88427927 (+)
G660853 NA other downstream 374231 88622313 ~ 88689342 (+)
G660886 NA other downstream 443812 88691894 ~ 88694076 (+)
G661162 NA other downstream 569003 88817085 ~ 88817655 (+)
G661172 NA other downstream 724902 88972984 ~ 88975830 (+)

Expression


Co-expression Network