G660721


Basic Information

Item Value
gene id G660721
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88291559 ~ 88292051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751736
TTGGCCAGCTTGGTCTCTATGTGCTGTcgtgtctcctgtctctccaggtCTGAGCGAACAGGGAAGATGTTTCTGTCCTCCAGCTCCTGCTGACTGGGCCGGTTACGAAGCTTCACCGTTAACAACTCCTTACGCATCCGCCGCGGCAGggtgcctacacacacacacacacacgcacgcacgcacgcacgcacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacgcacacgcacacgcacacgcacacgcacacgcacacacacacacacagagacacacacacacagacacacagacacacacacacacacacacacacacacacacacacacacacgcacacacacacacacacacacacacacacagacacagacacacgcacacacacacacacacacacacacacacacacacacacacacacaca

Function

NR:

description
phosphatase and actin regulator 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU751736 True 455 lncRNA 0.56 2 88291559 88292051

Neighbor

gene id symbol gene type direction distance location
LOC110528688 LOC106583827 coding upstream 50495 88238927 ~ 88241064 (+)
LOC110528686 NA coding upstream 164061 88120869 ~ 88127498 (+)
il10 il10 coding upstream 232741 88054111 ~ 88058818 (+)
dennd6aa dennd6a coding upstream 280074 87966569 ~ 88011485 (+)
LOC110528683 slmap coding upstream 338063 87951429 ~ 87953496 (+)
pdrg1 pdrg1 coding downstream 225384 88517435 ~ 88528083 (+)
LOC110528691 LOC106583835 coding downstream 487313 88777804 ~ 88781772 (+)
cass4 LOC106583834 coding downstream 498719 88790770 ~ 88852155 (+)
LOC110510506 LOC106583833 coding downstream 561045 88853096 ~ 88974945 (+)
LOC118965328 NA coding downstream 682651 88974702 ~ 89002957 (+)
G660717 NA non-coding upstream 10201 88280800 ~ 88281358 (+)
G660711 NA non-coding upstream 25536 88265488 ~ 88266023 (+)
G660705 NA non-coding upstream 35651 88253084 ~ 88255908 (+)
G660703 NA non-coding upstream 40172 88250731 ~ 88251387 (+)
G660702 NA non-coding upstream 43477 88247540 ~ 88248082 (+)
G660775 NA non-coding downstream 98504 88390555 ~ 88390857 (+)
G660802 NA non-coding downstream 163016 88455067 ~ 88510546 (+)
G660817 NA non-coding downstream 255865 88547916 ~ 88548191 (+)
G660820 NA non-coding downstream 261863 88553914 ~ 88639514 (+)
nisch LOC106583810 other upstream 904276 87346077 ~ 87387283 (+)
G659706 NA other upstream 1189289 87100464 ~ 87102270 (+)
G659136 NA other upstream 1769737 86521060 ~ 86521822 (+)
G659058 NA other upstream 1878974 86408702 ~ 86412974 (+)
G658887 NA other upstream 2395410 85895826 ~ 85896149 (+)
G660790 NA other downstream 130713 88422764 ~ 88427927 (+)
G660853 NA other downstream 330262 88622313 ~ 88689342 (+)
G660886 NA other downstream 399843 88691894 ~ 88694076 (+)
G661162 NA other downstream 525034 88817085 ~ 88817655 (+)
G661172 NA other downstream 680933 88972984 ~ 88975830 (+)

Expression


Co-expression Network