Gene
RNA
| Item | Value |
|---|---|
| gene id | G660817 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 88547916 ~ 88548191 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU751927 | True | 206 | lncRNA | 0.45 | 2 | 88547916 | 88548191 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdrg1 | pdrg1 | coding | upstream | 21470 | 88517435 ~ 88528083 (+) |
| LOC110528688 | LOC106583827 | coding | upstream | 306852 | 88238927 ~ 88241064 (+) |
| LOC110528686 | NA | coding | upstream | 420418 | 88120869 ~ 88127498 (+) |
| il10 | il10 | coding | upstream | 489098 | 88054111 ~ 88058818 (+) |
| dennd6aa | dennd6a | coding | upstream | 536431 | 87966569 ~ 88011485 (+) |
| LOC110528691 | LOC106583835 | coding | downstream | 231173 | 88777804 ~ 88781772 (+) |
| cass4 | LOC106583834 | coding | downstream | 242579 | 88790770 ~ 88852155 (+) |
| LOC110510506 | LOC106583833 | coding | downstream | 304905 | 88853096 ~ 88974945 (+) |
| LOC118965328 | NA | coding | downstream | 426511 | 88974702 ~ 89002957 (+) |
| LOC110529064 | phf2 | coding | downstream | 433527 | 88981718 ~ 89115525 (+) |
| G660802 | NA | non-coding | upstream | 37370 | 88455067 ~ 88510546 (+) |
| G660775 | NA | non-coding | upstream | 157059 | 88390555 ~ 88390857 (+) |
| G660721 | NA | non-coding | upstream | 255865 | 88291559 ~ 88292051 (+) |
| G660717 | NA | non-coding | upstream | 266558 | 88280800 ~ 88281358 (+) |
| G660820 | NA | non-coding | downstream | 5723 | 88553914 ~ 88639514 (+) |
| G660828 | NA | non-coding | downstream | 32579 | 88580770 ~ 88623595 (+) |
| G660829 | NA | non-coding | downstream | 33157 | 88581348 ~ 88583274 (+) |
| G660848 | NA | non-coding | downstream | 67933 | 88616124 ~ 88616599 (+) |
| G660854 | NA | non-coding | downstream | 74289 | 88622480 ~ 88623238 (+) |
| G660790 | NA | other | upstream | 119989 | 88422764 ~ 88427927 (+) |
| nisch | LOC106583810 | other | upstream | 1160633 | 87346077 ~ 87387283 (+) |
| G659706 | NA | other | upstream | 1445646 | 87100464 ~ 87102270 (+) |
| G659136 | NA | other | upstream | 2026094 | 86521060 ~ 86521822 (+) |
| G659058 | NA | other | upstream | 2135331 | 86408702 ~ 86412974 (+) |
| G660853 | NA | other | downstream | 74122 | 88622313 ~ 88689342 (+) |
| G660886 | NA | other | downstream | 143703 | 88691894 ~ 88694076 (+) |
| G661162 | NA | other | downstream | 268894 | 88817085 ~ 88817655 (+) |
| G661172 | NA | other | downstream | 424793 | 88972984 ~ 88975830 (+) |
