G660829


Basic Information

Item Value
gene id G660829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88581348 ~ 88583274 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU751942
aaaaattggaaatgatgcaggcAATTACATTTATGGAAGCTACAACCTACCTGAAATATTAAAGCTGATTCAGTGTTTCCTTGTACGTGTATCTTTGAAGGTAGCTGTTGGATGTTTTAAAGACAATCTAGAATGCTCTTTCTGCTGGTAGTTATCTGGTCTATAGTTTTAAACATGTCTCATAGTCTGGTTGAACATGGTATTTATCTCCCGTATAGATGTTACATAATCTATACAATTATAACAAGCTAATATGTCGATGGCATGTGTCCCAAATGATTTCCGAATCCCTGTGTAGTGCCTTAGTCTTGACCGGAgaactacgggccctggtcagatgtcatttgggacatagcccATGTTAGTAACGCAAACATGCAAGTTACACAGATTACAGCAGCGTATCAATACTATACACAGTATATAAACTCATACGAGGTATTTCAGTACCTCCTGTAGCTTAGTCTCAAAGTTACATATGAGTTTTTTAAGGGAACTAGAAGTTTCCGCAGTCAACCCGAGCTTTAGTAGGATCAATCTCTCAAGATATACACCGTGCCATGCTTATAGATGTGGTCAAATATTCACCCTTGCATGATTCACAATTTCTTCTATAACAAGTTGAACTTGAAAATAACTTTTGGTGTTTATACATGCATTGTTTGATTTACCTATGATCAAAAATGAAATGGAGATTTTTCAATTAAAAGTTAAAAAATGACCTGAACTAAATTATACAAACGAATTTGGTTGGAGGCAGTAATTCTGGTTAAATGTAATTTTTCTCACCTGTGGTAAGTAGCAGGAGACTACAGGGTATAAATAGTCATTCAACCAGTTTTGAAAATAAGAAACGGAACATTCTGCTCCATTGTAAAGTGCAAGGGTGCTAATATATTTGACAGCATCTGTAACAATAATAACATCAGCACTAACGAAGCCTGGCGTGGAAGACGTTATTTCCACGAAATAAATGGACGACTCTGAGGGTAGTCCTGGTTAGGGTTTCTGAGGGGATCCATGGTCCTGGTTAGGGTTTCTGAGGGGATCCATGGTCCTGGTTAGAGTTTCTGAGAGGATCCATGGTTCTGGTTAGAGTTTCTGAGGGGATGGTTAGGTTTTCAAAATTCCAATAATTTTCCAAAAGTTCCAGTAACTTTGCCAAAATTACCAGGTTTTTCCCAAAATTCTGGTTAGTGGATTCCGAATTAACTGATTATTCCTGCCTGATTAGGGGATTCCAACCAGGATTTGGGGAAAATTACCAGAATTTTGCCTAGTGAACAGTAATCTGGTTTAAACTAAACGTGGCTTTGGTGAGTTAAGACCGAGTGAACATAACTAGTACATTTTTAAACATGGAAATTAATTTTGTAAAGTCCTGGCATTCATAACTTGAGACATTATTCGTTAAGACATGTGTTGGAATACAATAGGGACATCATATGGTTTCTATTGAATACGTATGGCATCCATACATTACAGGTCACAGCATGTAGTTCTGGTATTCGTTCTACAGGAAGAAATGATAAACTTTATATTAATGGACACCATCACTCCATTTCAAGTCTGTTTATAAAGCCACTTCCAACGCAGCGGTTAGTCATCAGTGGTTAGCCAGTCTCACTGTATCTCTGGATGAGCACAGATCAACCCCAGAGGTGCGTTCAACCAGGCGAACAGTTTGTGATTGTTAGCTAACAGAAGCTAACACATTCTATATGATTTGTGTAAGCAACAAAAAATTAGCTAGCAGTCTGAAAAGATGTGGAGTGATGGAGCACAGATCCACACCAGGAGTCGTAGAGGATCACAGAGCCACACCAGGAGTAGTAGAGGAGCACAGAGCCACACCAGGAGTAGTAG

Function

NR:

description
PREDICTED: glutamine-rich protein 2-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU751942 True 1866 lncRNA 0.39 3 88581348 88583274

Neighbor

gene id symbol gene type direction distance location
pdrg1 pdrg1 coding upstream 54902 88517435 ~ 88528083 (+)
LOC110528688 LOC106583827 coding upstream 340284 88238927 ~ 88241064 (+)
LOC110528686 NA coding upstream 453850 88120869 ~ 88127498 (+)
il10 il10 coding upstream 522530 88054111 ~ 88058818 (+)
dennd6aa dennd6a coding upstream 569863 87966569 ~ 88011485 (+)
LOC110528691 LOC106583835 coding downstream 196090 88777804 ~ 88781772 (+)
cass4 LOC106583834 coding downstream 207496 88790770 ~ 88852155 (+)
LOC110510506 LOC106583833 coding downstream 269822 88853096 ~ 88974945 (+)
LOC118965328 NA coding downstream 391428 88974702 ~ 89002957 (+)
LOC110529064 phf2 coding downstream 398444 88981718 ~ 89115525 (+)
G660817 NA non-coding upstream 33157 88547916 ~ 88548191 (+)
G660802 NA non-coding upstream 70802 88455067 ~ 88510546 (+)
G660775 NA non-coding upstream 190491 88390555 ~ 88390857 (+)
G660721 NA non-coding upstream 289297 88291559 ~ 88292051 (+)
G660848 NA non-coding downstream 32850 88616124 ~ 88616599 (+)
G660854 NA non-coding downstream 39206 88622480 ~ 88623238 (+)
G660886 NA non-coding downstream 110516 88691894 ~ 88694076 (+)
G661118 NA non-coding downstream 164933 88748207 ~ 88748825 (+)
G661130 NA non-coding downstream 178310 88761584 ~ 88761873 (+)
G660790 NA other upstream 153421 88422764 ~ 88427927 (+)
nisch LOC106583810 other upstream 1194065 87346077 ~ 87387283 (+)
G659706 NA other upstream 1479078 87100464 ~ 87102270 (+)
G659136 NA other upstream 2059526 86521060 ~ 86521822 (+)
G659058 NA other upstream 2168763 86408702 ~ 86412974 (+)
G660853 NA other downstream 39039 88622313 ~ 88689342 (+)
G661162 NA other downstream 233811 88817085 ~ 88817655 (+)
G661172 NA other downstream 389710 88972984 ~ 88975830 (+)

Expression


Co-expression Network