G660886


Basic Information

Item Value
gene id G660886
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88691894 ~ 88694076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752005
gtaccggtacagagtcaatgtggaggctatatacagggtgttacggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacagggtgttacggtacagagtcaatgtggaggctatataaagggtgttacggtacagagtcaatgtggaggctatataaagggtattacggtacagagtcaatgtggagactatatacagggtattacggtacagagtcaatgtggagactatatacagggtattacggtacagagtcaatgtggaggctatatacagggtgttacggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggagactatatacagggtgttacggtacagagtcaatgtggaggctatatacagggtgttacggtacagagtcaatgtggaggctatatacagggtgttacggtacagagtcaatgtggagactatatacagggtgttacggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggagactatatacagggggtacctgtacagagtcaatgtggaggcgatatacggtacagagtcaatgtggaggctatatacaggggatactggtacagagtcaatgtggaggttatatacagggggtactggtacagagtcaatgtggaggttatatacagggggtactggtacagagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggaggctatatacaggg
>TU752006
ggttatatacagggggtactggtacagagtcaatgtggaggctatatacaggggatactggtacagagtcaatgtggaggttatatacagggggtactggtacagagtcaatgtggaggttatatacagggggtactggtacagagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggaggctatatacaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752005 False 808 TUCP 0.45 3 88691894 88694076
TU752006 True 209 lncRNA 0.47 2 88693790 88694076

Neighbor

gene id symbol gene type direction distance location
pdrg1 pdrg1 coding upstream 167344 88517435 ~ 88528083 (+)
LOC110528688 LOC106583827 coding upstream 452726 88238927 ~ 88241064 (+)
LOC110528686 NA coding upstream 566292 88120869 ~ 88127498 (+)
il10 il10 coding upstream 634972 88054111 ~ 88058818 (+)
dennd6aa dennd6a coding upstream 682305 87966569 ~ 88011485 (+)
LOC110528691 LOC106583835 coding downstream 85288 88777804 ~ 88781772 (+)
cass4 LOC106583834 coding downstream 96694 88790770 ~ 88852155 (+)
LOC110510506 LOC106583833 coding downstream 159020 88853096 ~ 88974945 (+)
LOC118965328 NA coding downstream 280626 88974702 ~ 89002957 (+)
LOC110529064 phf2 coding downstream 287642 88981718 ~ 89115525 (+)
G660820 NA non-coding upstream 54276 88553914 ~ 88639514 (+)
G660828 NA non-coding upstream 70195 88580770 ~ 88623595 (+)
G660854 NA non-coding upstream 70552 88622480 ~ 88623238 (+)
G660848 NA non-coding upstream 77191 88616124 ~ 88616599 (+)
G660829 NA non-coding upstream 110516 88581348 ~ 88583274 (+)
G661118 NA non-coding downstream 54131 88748207 ~ 88748825 (+)
G661130 NA non-coding downstream 67508 88761584 ~ 88761873 (+)
G661157 NA non-coding downstream 101004 88795080 ~ 88797770 (+)
G661164 NA non-coding downstream 131147 88825223 ~ 88825664 (+)
G660853 NA other upstream 4448 88622313 ~ 88689342 (+)
G660790 NA other upstream 265863 88422764 ~ 88427927 (+)
nisch LOC106583810 other upstream 1306507 87346077 ~ 87387283 (+)
G659706 NA other upstream 1591520 87100464 ~ 87102270 (+)
G659136 NA other upstream 2171968 86521060 ~ 86521822 (+)
G661162 NA other downstream 123009 88817085 ~ 88817655 (+)
G661172 NA other downstream 278908 88972984 ~ 88975830 (+)
G661489 NA other downstream 485217 89179293 ~ 89180204 (+)
G661491 NA other downstream 486738 89180814 ~ 89182037 (+)

Expression


Co-expression Network