G661130


Basic Information

Item Value
gene id G661130
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88761584 ~ 88761873 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752277
gtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagtctccacattgactctgtaccgtaacaccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatataacctccacattgactctgtaccagtaccccctgtatatagtctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752277 True 290 lncRNA 0.50 1 88761584 88761873

Neighbor

gene id symbol gene type direction distance location
pdrg1 pdrg1 coding upstream 235138 88517435 ~ 88528083 (+)
LOC110528688 LOC106583827 coding upstream 520520 88238927 ~ 88241064 (+)
LOC110528686 NA coding upstream 634086 88120869 ~ 88127498 (+)
il10 il10 coding upstream 702766 88054111 ~ 88058818 (+)
dennd6aa dennd6a coding upstream 750099 87966569 ~ 88011485 (+)
LOC110528691 LOC106583835 coding downstream 17491 88777804 ~ 88781772 (+)
cass4 LOC106583834 coding downstream 28897 88790770 ~ 88852155 (+)
LOC110510506 LOC106583833 coding downstream 91223 88853096 ~ 88974945 (+)
LOC118965328 NA coding downstream 212829 88974702 ~ 89002957 (+)
LOC110529064 phf2 coding downstream 219845 88981718 ~ 89115525 (+)
G661118 NA non-coding upstream 12759 88748207 ~ 88748825 (+)
G660886 NA non-coding upstream 67508 88691894 ~ 88694076 (+)
G660828 NA non-coding upstream 137989 88580770 ~ 88623595 (+)
G661157 NA non-coding downstream 33207 88795080 ~ 88797770 (+)
G661164 NA non-coding downstream 63350 88825223 ~ 88825664 (+)
G661165 NA non-coding downstream 63827 88825700 ~ 88826190 (+)
G661166 NA non-coding downstream 64487 88826360 ~ 88826595 (+)
G660853 NA other upstream 72242 88622313 ~ 88689342 (+)
G660790 NA other upstream 333657 88422764 ~ 88427927 (+)
nisch LOC106583810 other upstream 1374301 87346077 ~ 87387283 (+)
G659706 NA other upstream 1659314 87100464 ~ 87102270 (+)
G661162 NA other downstream 55212 88817085 ~ 88817655 (+)
G661172 NA other downstream 211111 88972984 ~ 88975830 (+)
G661489 NA other downstream 417420 89179293 ~ 89180204 (+)
G661491 NA other downstream 418941 89180814 ~ 89182037 (+)

Expression


Co-expression Network