Gene
RNA
| Item | Value |
|---|---|
| gene id | G661165 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 88825700 ~ 88826190 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU752328 | True | 491 | lncRNA | 0.54 | 1 | 88825700 | 88826190 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528691 | LOC106583835 | coding | upstream | 43928 | 88777804 ~ 88781772 (+) |
| pdrg1 | pdrg1 | coding | upstream | 299254 | 88517435 ~ 88528083 (+) |
| LOC110528688 | LOC106583827 | coding | upstream | 584636 | 88238927 ~ 88241064 (+) |
| LOC110528686 | NA | coding | upstream | 698202 | 88120869 ~ 88127498 (+) |
| il10 | il10 | coding | upstream | 766882 | 88054111 ~ 88058818 (+) |
| LOC110510506 | LOC106583833 | coding | downstream | 26906 | 88853096 ~ 88974945 (+) |
| LOC118965328 | NA | coding | downstream | 148512 | 88974702 ~ 89002957 (+) |
| LOC110529064 | phf2 | coding | downstream | 155528 | 88981718 ~ 89115525 (+) |
| LOC118965329 | NA | coding | downstream | 227957 | 89053940 ~ 89055968 (+) |
| ptpdc1a | LOC106583842 | coding | downstream | 572685 | 89398875 ~ 89474883 (+) |
| G661164 | NA | non-coding | upstream | 36 | 88825223 ~ 88825664 (+) |
| G661157 | NA | non-coding | upstream | 27930 | 88795080 ~ 88797770 (+) |
| G661130 | NA | non-coding | upstream | 63827 | 88761584 ~ 88761873 (+) |
| G661118 | NA | non-coding | upstream | 76875 | 88748207 ~ 88748825 (+) |
| G661166 | NA | non-coding | downstream | 170 | 88826360 ~ 88826595 (+) |
| G661167 | NA | non-coding | downstream | 794 | 88826984 ~ 88827278 (+) |
| G661168 | NA | non-coding | downstream | 2433 | 88828623 ~ 88828933 (+) |
| G661154 | NA | non-coding | downstream | 6822 | 88833012 ~ 88834087 (+) |
| G661181 | NA | non-coding | downstream | 13811 | 88840001 ~ 88840400 (+) |
| G661162 | NA | other | upstream | 8045 | 88817085 ~ 88817655 (+) |
| G660886 | NA | other | upstream | 131624 | 88691894 ~ 88694076 (+) |
| G660853 | NA | other | upstream | 136358 | 88622313 ~ 88689342 (+) |
| G660790 | NA | other | upstream | 397773 | 88422764 ~ 88427927 (+) |
| nisch | LOC106583810 | other | upstream | 1438417 | 87346077 ~ 87387283 (+) |
| G661172 | NA | other | downstream | 146794 | 88972984 ~ 88975830 (+) |
| G661489 | NA | other | downstream | 353103 | 89179293 ~ 89180204 (+) |
| G661491 | NA | other | downstream | 354624 | 89180814 ~ 89182037 (+) |
| G661541 | NA | other | downstream | 429570 | 89255760 ~ 89256424 (+) |
