G661166


Basic Information

Item Value
gene id G661166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88826360 ~ 88826595 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752329
gactctctgtggtcagagtagggtgtcctgactctctgtggtcagagtagaggtgtcctgactctctgtggtcagagtaggtgtgttaaccctggtgtcctgactctctgtggtcagagtaggggtgttaaccccggtttcctggctaaattcccaatctggccctcaaaccatcacggtcacctaataatccccagtttacaattgactcattcatccccggtaactattcccca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752329 True 236 lncRNA 0.51 1 88826360 88826595

Neighbor

gene id symbol gene type direction distance location
LOC110528691 LOC106583835 coding upstream 44588 88777804 ~ 88781772 (+)
pdrg1 pdrg1 coding upstream 299914 88517435 ~ 88528083 (+)
LOC110528688 LOC106583827 coding upstream 585296 88238927 ~ 88241064 (+)
LOC110528686 NA coding upstream 698862 88120869 ~ 88127498 (+)
il10 il10 coding upstream 767542 88054111 ~ 88058818 (+)
LOC110510506 LOC106583833 coding downstream 26501 88853096 ~ 88974945 (+)
LOC118965328 NA coding downstream 148107 88974702 ~ 89002957 (+)
LOC110529064 phf2 coding downstream 155123 88981718 ~ 89115525 (+)
LOC118965329 NA coding downstream 227552 89053940 ~ 89055968 (+)
ptpdc1a LOC106583842 coding downstream 572280 89398875 ~ 89474883 (+)
G661165 NA non-coding upstream 170 88825700 ~ 88826190 (+)
G661164 NA non-coding upstream 696 88825223 ~ 88825664 (+)
G661157 NA non-coding upstream 28590 88795080 ~ 88797770 (+)
G661130 NA non-coding upstream 64487 88761584 ~ 88761873 (+)
G661167 NA non-coding downstream 389 88826984 ~ 88827278 (+)
G661168 NA non-coding downstream 2028 88828623 ~ 88828933 (+)
G661154 NA non-coding downstream 6417 88833012 ~ 88834087 (+)
G661181 NA non-coding downstream 13406 88840001 ~ 88840400 (+)
G661190 NA non-coding downstream 51768 88878363 ~ 88878686 (+)
G661162 NA other upstream 8705 88817085 ~ 88817655 (+)
G660886 NA other upstream 132284 88691894 ~ 88694076 (+)
G660853 NA other upstream 137018 88622313 ~ 88689342 (+)
G660790 NA other upstream 398433 88422764 ~ 88427927 (+)
nisch LOC106583810 other upstream 1439077 87346077 ~ 87387283 (+)
G661172 NA other downstream 146389 88972984 ~ 88975830 (+)
G661489 NA other downstream 352698 89179293 ~ 89180204 (+)
G661491 NA other downstream 354219 89180814 ~ 89182037 (+)
G661541 NA other downstream 429165 89255760 ~ 89256424 (+)

Expression


Co-expression Network