Gene
RNA
| Item | Value |
|---|---|
| gene id | G661190 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 88878363 ~ 88878686 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU752364 | True | 289 | lncRNA | 0.39 | 2 | 88878363 | 88878686 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cass4 | LOC106583834 | coding | upstream | 26208 | 88790770 ~ 88852155 (+) |
| LOC110528691 | LOC106583835 | coding | upstream | 96591 | 88777804 ~ 88781772 (+) |
| pdrg1 | pdrg1 | coding | upstream | 351917 | 88517435 ~ 88528083 (+) |
| LOC110528688 | LOC106583827 | coding | upstream | 637299 | 88238927 ~ 88241064 (+) |
| LOC110528686 | NA | coding | upstream | 750865 | 88120869 ~ 88127498 (+) |
| LOC118965328 | NA | coding | downstream | 96016 | 88974702 ~ 89002957 (+) |
| LOC110529064 | phf2 | coding | downstream | 103032 | 88981718 ~ 89115525 (+) |
| LOC118965329 | NA | coding | downstream | 175461 | 89053940 ~ 89055968 (+) |
| ptpdc1a | LOC106583842 | coding | downstream | 520189 | 89398875 ~ 89474883 (+) |
| LOC110529066 | LOC106583848 | coding | downstream | 601151 | 89479837 ~ 89492439 (+) |
| G661181 | NA | non-coding | upstream | 37963 | 88840001 ~ 88840400 (+) |
| G661154 | NA | non-coding | upstream | 44276 | 88833012 ~ 88834087 (+) |
| G661168 | NA | non-coding | upstream | 49430 | 88828623 ~ 88828933 (+) |
| G661167 | NA | non-coding | upstream | 51085 | 88826984 ~ 88827278 (+) |
| G661166 | NA | non-coding | upstream | 51768 | 88826360 ~ 88826595 (+) |
| G661197 | LOC106562215 | non-coding | downstream | 18020 | 88896706 ~ 88901356 (+) |
| G661203 | NA | non-coding | downstream | 28227 | 88906913 ~ 88909728 (+) |
| G661208 | NA | non-coding | downstream | 56092 | 88934778 ~ 88935037 (+) |
| G661229 | NA | non-coding | downstream | 136155 | 89014841 ~ 89017184 (+) |
| G661162 | NA | other | upstream | 60708 | 88817085 ~ 88817655 (+) |
| G660886 | NA | other | upstream | 184287 | 88691894 ~ 88694076 (+) |
| G660853 | NA | other | upstream | 189021 | 88622313 ~ 88689342 (+) |
| G660790 | NA | other | upstream | 450436 | 88422764 ~ 88427927 (+) |
| nisch | LOC106583810 | other | upstream | 1491080 | 87346077 ~ 87387283 (+) |
| G661172 | NA | other | downstream | 94298 | 88972984 ~ 88975830 (+) |
| G661489 | NA | other | downstream | 300607 | 89179293 ~ 89180204 (+) |
| G661491 | NA | other | downstream | 302128 | 89180814 ~ 89182037 (+) |
| G661541 | NA | other | downstream | 377074 | 89255760 ~ 89256424 (+) |
