G661208


Basic Information

Item Value
gene id G661208
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88934778 ~ 88935037 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752383
AGCAGGTGGGACAGGGGACATAGCAGGTGGGACAGGGGACATAGCAAGTGGGACAGGGGACATAGCAGGTGAGACAGGTGACATAGCAGGTGAGGCAGGTGACATAGCAGGTGAGACAGGTGACATAGCAGGTGAGACAGGTGACATAGCAGGTTGGACAGGGGACATAGCAGGTTGGACAGGGGACATAGCAGGTTGGACAGGGGACATAGCAGGTTGGACAGGGGACATAGCAGGTG

Function

NR:

description
hypothetical protein cypCar_00020904, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752383 True 239 lncRNA 0.57 2 88934778 88935037

Neighbor

gene id symbol gene type direction distance location
cass4 LOC106583834 coding upstream 82623 88790770 ~ 88852155 (+)
LOC110528691 LOC106583835 coding upstream 153006 88777804 ~ 88781772 (+)
pdrg1 pdrg1 coding upstream 408332 88517435 ~ 88528083 (+)
LOC110528688 LOC106583827 coding upstream 693714 88238927 ~ 88241064 (+)
LOC110528686 NA coding upstream 807280 88120869 ~ 88127498 (+)
LOC118965328 NA coding downstream 39665 88974702 ~ 89002957 (+)
LOC110529064 phf2 coding downstream 46681 88981718 ~ 89115525 (+)
LOC118965329 NA coding downstream 119110 89053940 ~ 89055968 (+)
ptpdc1a LOC106583842 coding downstream 463838 89398875 ~ 89474883 (+)
LOC110529066 LOC106583848 coding downstream 544800 89479837 ~ 89492439 (+)
G661203 NA non-coding upstream 25050 88906913 ~ 88909728 (+)
G661197 LOC106562215 non-coding upstream 33422 88896706 ~ 88901356 (+)
G661190 NA non-coding upstream 56092 88878363 ~ 88878686 (+)
G661181 NA non-coding upstream 94378 88840001 ~ 88840400 (+)
G661154 NA non-coding upstream 100691 88833012 ~ 88834087 (+)
G661229 NA non-coding downstream 79804 89014841 ~ 89017184 (+)
G661233 NA non-coding downstream 87353 89022390 ~ 89022761 (+)
G661235 NA non-coding downstream 89264 89024301 ~ 89025240 (+)
G661234 NA non-coding downstream 89664 89024701 ~ 89027124 (+)
G661162 NA other upstream 117123 88817085 ~ 88817655 (+)
G660886 NA other upstream 240702 88691894 ~ 88694076 (+)
G660853 NA other upstream 245436 88622313 ~ 88689342 (+)
G660790 NA other upstream 506851 88422764 ~ 88427927 (+)
nisch LOC106583810 other upstream 1547495 87346077 ~ 87387283 (+)
G661172 NA other downstream 37947 88972984 ~ 88975830 (+)
G661489 NA other downstream 244256 89179293 ~ 89180204 (+)
G661491 NA other downstream 245777 89180814 ~ 89182037 (+)
G661541 NA other downstream 320723 89255760 ~ 89256424 (+)

Expression


Co-expression Network