G661172


Basic Information

Item Value
gene id G661172
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88972984 ~ 88975830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752344
GATTTCTTATTTTTAACAAGAGATCTGCGCAGACCAGTACCAAACAGAATAAATACTACCAGTCACTAAATACTGGGCCAgtcactccactctctctccactgatATCGACATGATTACTATCGTGATATGACCatggtttgtgtcccaaatgtattccctatatacagtacttttgaccaggcacCCATAGGGTTGATaactgggctctggtcaaaagtagtgcactatgtagggaataggatgcagtTTGAGAAGCAGGCCATGTCTGACTGGGTACTCTAATCCCTTTGAGATAATACTGAAGCCGAAACTACAATGCTTTTGTCTCTTTTAGTTCCTTTATAGGTTAAGATGCACCAGCAGTATGTACTTGGCGCCATATATTTGCCATTGTAACTTTGTTGTCACAGTAAATAACATTTTGAGAGTTTTAACAACAGAGAAGCAGATGGAGTCACAGAATGcttccccaatggcaccctagtctgtatatagtgcactacttttgacgtgGATAGATGAAAATTTGATAATTTAAAAACAACCACACGTGGATAATGCGTTTAAAAAATCACGAAAACGTTTTTCCATTTTGGTCCcctttaaataaatacaacaagTAATTGAAAAATAAAACTAGGTTAGAATAGTTGCTACTAGCTAGATCAGTCTGATTAGATCAGCTAAATtagtgtgttttatttatttcattttttattatttaacttAGATCAAGTCTGAGTTCTTCTTGAAGCTTCCAGCATGTGGTCATGAGGATCTGGAAGTTCATAGCTGTACAGTAGATGGTCAGAGGAGGTGGTGGTGACTCTGGTCAGGGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGgtcagaggaggtggtggtgactCTGGTCAGAGGAGGTGGTGGCGACTCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgattCTGgtcagaggaggtggtggtgactGGTCAGAGGAGGTGTTGGTGACTCTGGTCAGAGGAGGTGTTGGTGACTCTGGTCAGAGGAGGTGTTGGTGACTCTGGTCAGAGGAGGTGTTGGTGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTGGTCAGAGGAGGTGTTGGCGACTCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgactCTGgtcagaggaggtggtggtgattCTGgtcagaggaggtggtggtgactGGTCAGAGGAGGTGTTGGTGACTCTGGTCAGAGGAGGTGTTGGTGACTCTGGTCAGAGGAGGTGTTGGTGACTCTGGTCAGAGGAGGTGTTGGTGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGAAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGAGGAGGTGGTGGCGACTCTGGTCAGTGGTGGTGACTGGTCAGCATGTCCAAGGGCAGGTAGGGAGTCCCATGTCATCAAGGCATCCCTGTAAAATGTATCTTCTTCCTCTGTATTGGGGCTCTGCGATGAAGTTTGATCTTCCCTCAGAGGACAGTCCACAAGCCGTCCCACTCGGCGTGCATAGCCTACAGTCCTCCTCTTGGGTCACCGTTGgtggaaaaccagccatgtcacccTTTAttcaagtcagtattcgacgtccatcTATGTCTGAGGACGTCGAGCGATGACAgggaaactggccactaggggcaacagtgagcgctgttaccttcaagtaggttttggttttgctagggtggggatggtggatgggcgtaAACTTGATTCAAAAGGTTGCAAGGtcgaatccagcgatagaaagttgtttttgatattttaGTTTTAAGCCTACCCTAAATCTTTACCCTTTCCATCCGGAGTTAAAGTTAACCTTAAACGCTTCAGAATTTGACTTTTCAGAAAGAATGGATAAACGTCTACTTGTGATGCGAGACTGAGAGCTAGTTGGGAAAACAACCCAAAACCAGTAGGTTCAATCTGAATAAAACACCTGCTAGCTAGCATTTTAATGCATTTATGGGAAGGAATCCAATTCATGATATCAAGACTTGATCTGCACTCATGTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752344 True 2597 TUCP 0.50 2 88972984 88975830

Neighbor

gene id symbol gene type direction distance location
cass4 LOC106583834 coding upstream 120829 88790770 ~ 88852155 (+)
LOC110528691 LOC106583835 coding upstream 191212 88777804 ~ 88781772 (+)
pdrg1 pdrg1 coding upstream 446538 88517435 ~ 88528083 (+)
LOC110528688 LOC106583827 coding upstream 731920 88238927 ~ 88241064 (+)
LOC110528686 NA coding upstream 845486 88120869 ~ 88127498 (+)
LOC110529064 phf2 coding downstream 5888 88981718 ~ 89115525 (+)
LOC118965329 NA coding downstream 78317 89053940 ~ 89055968 (+)
ptpdc1a LOC106583842 coding downstream 423045 89398875 ~ 89474883 (+)
LOC110529066 LOC106583848 coding downstream 504007 89479837 ~ 89492439 (+)
iqsec1b iqsec1 coding downstream 1120192 90096022 ~ 90162648 (+)
G661208 NA non-coding upstream 37947 88934778 ~ 88935037 (+)
G661203 NA non-coding upstream 63256 88906913 ~ 88909728 (+)
G661197 LOC106562215 non-coding upstream 71628 88896706 ~ 88901356 (+)
G661190 NA non-coding upstream 94298 88878363 ~ 88878686 (+)
G661181 NA non-coding upstream 132584 88840001 ~ 88840400 (+)
LOC118965328 NA non-coding downstream 1895 88974702 ~ 89002957 (+)
G661229 NA non-coding downstream 39011 89014841 ~ 89017184 (+)
G661233 NA non-coding downstream 46560 89022390 ~ 89022761 (+)
G661235 NA non-coding downstream 48471 89024301 ~ 89025240 (+)
G661234 NA non-coding downstream 48871 89024701 ~ 89027124 (+)
G661162 NA other upstream 155329 88817085 ~ 88817655 (+)
G660886 NA other upstream 278908 88691894 ~ 88694076 (+)
G660853 NA other upstream 283642 88622313 ~ 88689342 (+)
G660790 NA other upstream 545057 88422764 ~ 88427927 (+)
nisch LOC106583810 other upstream 1585701 87346077 ~ 87387283 (+)
G661489 NA other downstream 203463 89179293 ~ 89180204 (+)
G661491 NA other downstream 204984 89180814 ~ 89182037 (+)
G661541 NA other downstream 279930 89255760 ~ 89256424 (+)
G661692 NA other downstream 492154 89467984 ~ 89471391 (+)

Expression


Co-expression Network