G661390


Basic Information

Item Value
gene id G661390
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 88975934 ~ 88977651 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752614
cattcaggctgaaacaacaaaatgtgggaaaaggcaAGTGATGTGAACACTTCCTGAAGGCAGTACATTTATATATCCTACTGGCTCTGACTGGGATGACCATGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCATGGGAGGACTGGGATGTCCATGGGAGGACTGGGATGACTCTGGGAGGACTGGGATGACCAAGGGTGGACTGGGATGACCATGGGAGGACTGGGATGACTCTGGGAGGACTGTGTGtatgtaccaaatggcaccctattctttatagtgcactactatagttGCCATGGTGCCCTAGTAGCAGCCTAAGCAGAGAGCTCCTGTACATTTTGTTACTAAACCACAGCCGATGGGTTTAGTTTTTATGATGGTAATGACGTTTGTTTTTAGGTGGAGGTCGCTAGCTACAGTATAGCGTatcttttagctagctagctgtggtgTAAGCTAGCTtgatttaacaagttgaggaaaaGTTTACTCAACAAAGCATGTTTTATTATCAACTGAAACAATAGGTTTCCCCTGTCTTGAATGAAAAGTCCATATTTTACAATCTCCCTAAATCAATTCAATCCCTGACGAGACACTAGGCTCTCCATCTAGTCTTGCATTGTGAAATCCTCCACCTCACTCCATCCTGTAGCGGAACAATATTGAAATGAAGTACGGCGTAATGAAATACGGCACTATGTAAACAGGGCACAAACGGTAAGGCTACTCCTGGATTACTATTGAAGCCTGTTGTGCTTAGTTGCGCCTCGTGACTGAAATAGCATCACCCAAGTGGGCGCTGTATTTTGGtagcagtagctagctagctagtccaAATAACTTAATTTGACTGAGTCCTACTACGAAGCCACAGACAACATGGATGGCAAAGACACCATGATGACAATGTGCTGCCTTCTCTCCTCTTTTAACCACCACCTGCCTCCGCTGACCTCACTCAAGTCATGAACTTTCTCAACCTTCAATCTCTTGACCATCAATCTACTCATGATGATGatggatgttttttgttgtttctctacAGCACTAACATTTCTGTATGTGATTGAATACCTATTATTGTTGAATCAATTATTATTACGTTCAATCTATAGTTACCGTGGCGCCTAATGGCAGTCTAGGCAGAGAGCTCATGTAAAT
>TU752615
cattcaggctgaaacaacaaaatgtgggaaaaggcaAGTGATGTGAACACTTCCTGAAGGCAGTACATTTATATATCCTACTGGCTCTGACTGGGATGACCATGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACTCTGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCATGAGTGGACTGGGATGACCATGGGAGGACTGGGATGACTCTGGGAGGACTGTGTGtatgtaccaaatggcaccctattctttatagtgcactactatagttGCCATGGTGCCCTAGTAGCAGCCTAAGCAGAGAGCTCCTGTACATTTTGTTACTAAACCACAGCCGATGGGTTTAGTTTTTATGATGGTAATGACGTTTGTTTTTAGGTGGAGGTCGCTAGCTACAGTATAGCGTatcttttagctagctagctgtggtgTAAGCTAGCTtgatttaacaagttgaggaaaaGTTTACTCAACAAAGCATGTTTTATTATCAACTGAAACAATAGGTTTCCCCTGTCTTGAATGAAAAGTCCATATTTTACAATCTCCCTAAATCAATTCAATCCCTGACGAGACACTAGGCTCTCCATCTAGTCTTGCATTGTGAAATCCTCCACCTCACTCCATCCTGTAGCGGAACAATATTGAAATGAAGTACGGCGTAATGAAATACGGCACTATGTAAACAGGGCACAAACGGTAAGGCTACTCCTGGATTACTATTGAAGCCTGTTGTGCTTAGTTGCGCCTCGTGACTGAAATAGCATCACCCAAGTGGGCGCTGTATTTTGGtagcagtagctagctagctagtccaAATAACTTAATTTGACTGAGTCCTACTACGAAGCCACAGACAACATGGATGGCAAAGACACCATGATGACAATGTGCTGCCTTCTCTCCTCTTTTAACCACCACCTGCCTCCGCTGACCTCACTCAAGTCATGAACTTTCTCAACCTTCAATCTCTTGACCATCAATCTACTCATGATGATGatggatgttttttgttgtttctctacAGCACTAACATTTCTGTATGTGATTGAATACCTATTATTGTTGAATCAATTATTATTACGTTCAATCTATAGTTACCGTGGCGCCTAATGGCAGTCTAGGCAGAGAGCTCATGTAAAT
>TU752616
cattcaggctgaaacaacaaaatgtgggaaaaggcaAGTGATGTGAACACTTCCTGAAGGCAGTACATTTATATATCCTACTGGCTCTGACTGGGATGACCATGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACTCTGGGAGGACTGTGTGtatgtaccaaatggcaccctattctttatagtgcactactatagttGCCATGGTGCCCTAGTAGCAGCCTAAGCAGAGAGCTCCTGTACATTTTGTTACTAAACCACAGCCGATGGGTTTAGTTTTTATGATGGTAATGACGTTTGTTTTTAGGTGGAGGTCGCTAGCTACAGTATAGCGTatcttttagctagctagctgtggtgTAAGCTAGCTtgatttaacaagttgaggaaaaGTTTACTCAACAAAGCATGTTTTATTATCAACTGAAACAATAGGTTTCCCCTGTCTTGAATGAAAAGTCCATATTTTACAATCTCCCTAAATCAATTCAATCCCTGACGAGACACTAGGCTCTCCATCTAGTCTTGCATTGTGAAATCCTCCACCTCACTCCATCCTGTAGCGGAACAATATTGAAATGAAGTACGGCGTAATGAAATACGGCACTATGTAAACAGGGCACAAACGGTAAGGCTACTCCTGGATTACTATTGAAGCCTGTTGTGCTTAGTTGCGCCTCGTGACTGAAATAGCATCACCCAAGTGGGCGCTGTATTTTGGtagcagtagctagctagctagtccaAATAACTTAATTTGACTGAGTCCTACTACGAAGCCACAGACAACATGGATGGCAAAGACACCATGATGACAATGTGCTGCCTTCTCTCCTCTTTTAACCACCACCTGCCTCCGCTGACCTCACTCAAGTCATGAACTTTCTCAACCTTCAATCTCTTGACCATCAATCTACTCATGATGATGatggatgttttttgttgtttctctacAGCACTAACATTTCTGTATGTGATTGAATACCTATTATTGTTGAATCAATTATTATTACGTTCAATCTATAGTTACCGTGGCGCCTAATGGCAGTCTAGGCAGAGAGCTCATGTAAAT
>TU752617
cattcaggctgaaacaacaaaatgtgggaaaaggcaAGTGATGTGAACACTTCCTGAAGGCAGTACATTTATATATCCTACTGGCTCTGACTGGGATGACCATGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGAACTGGGATGACCATGGGAGGACTGGGATGACCATGGGATGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCATGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCAAGGGAGGACTGGGATGACCATGGGAGGACTGGGATGTCCATGGGAGGACTGGGATGACTCTGGGAGGACTGGGATGACCATGAGTGGACTGGGATGACCATGGGAGGACTGGGATGACTCTGGGAGGACTGTGTGtatgtaccaaatggcaccctattctttatagtgcactactatagttGCCATGGTGCCCTAGTAGCAGCCTAAGCAGAGAGCTCCTGTACATTTTGTTACTAAACCACAGCCGATGGGTTTAGTTTTTATGATGGTAATGACGTTTGTTTTTAGGTGGAGGTCGCTAGCTACAGTATAGCGTatcttttagctagctagctgtggtgTAAGCTAGCTtgatttaacaagttgaggaaaaGTTTACTCAACAAAGCATGTTTTATTATCAACTGAAACAATAGGTTTCCCCTGTCTTGAATGAAAAGTCCATATTTTACAATCTCCCTAAATCAATTCAATCCCTGACGAGACACTAGGCTCTCCATCTAGTCTTGCATTGTGAAATCCTCCACCTCACTCCATCCTGTAGCGGAACAATATTGAAATGAAGTACGGCGTAATGAAATACGGCACTATGTAAACAGGGCACAAACGGTAAGGCTACTCCTGGATTACTATTGAAGCCTGTTGTGCTTAGTTGCGCCTCGTGACTGAAATAGCATCACCCAAGTGGGCGCTGTATTTTGGtagcagtagctagctagctagtccaAATAACTTAATTTGACTGAGTCCTACTACGAAGCCACAGACAACATGGATGGCAAAGACACCATGATGACAATGTGCTGCCTTCTCTCCTCTTTTAACCACCACCTGCCTCCGCTGACCTCACTCAAGTCATGAACTTTCTCAACCTTCAATCTCTTGACCATCAATCTACTCATGATGATGatggatgttttttgttgtttctctacAGCACTAACATTTCTGTATGTGATTGAATACCTATTATTGTTGAATCAATTATTATTACGTTCAATCTATAGTTACCGTGGCGCCTAATGGCAGTCTAGGCAGAGAGCTCATGTAAAT

Function

NR:

description
Glutaredoxin-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752614 False 1698 lncRNA 0.49 2 88975934 88977651
TU752615 False 1558 lncRNA 0.47 2 88975934 88977651
TU752616 False 1478 lncRNA 0.47 2 88975934 88977651
TU752617 True 1698 lncRNA 0.49 2 88975934 88977651

Neighbor

gene id symbol gene type direction distance location
pdcd2l LOC106583835 coding downstream 196464 88777751 ~ 88779470 (-)
LOC110528689 NA coding downstream 333385 88585172 ~ 88642549 (-)
dyrk3 LOC106583824 coding downstream 521844 88421430 ~ 88454090 (-)
LOC118965327 NA coding downstream 556334 88417178 ~ 88420395 (-)
LOC110528687 LOC106583825 coding downstream 630189 88253063 ~ 88345745 (-)
LOC110528694 LOC106583841 coding upstream 411142 89388793 ~ 89392239 (-)
LOC110528698 wnt7a coding upstream 610446 89588097 ~ 89672181 (-)
LOC110528697 LOC107727849 coding upstream 721961 89699612 ~ 89827294 (-)
hdac11 hdac11 coding upstream 908921 89886572 ~ 89946188 (-)
LOC118965398 NA coding upstream 1282002 90259653 ~ 90259806 (-)
G661389 NA non-coding downstream 92 88972488 ~ 88975842 (-)
G661377 LOC106583833 non-coding downstream 43946 88920890 ~ 88931988 (-)
G661369 NA non-coding downstream 73294 88895354 ~ 88902640 (-)
G661370 NA non-coding downstream 78071 88895970 ~ 88897863 (-)
G661338 NA non-coding downstream 139964 88834194 ~ 88835970 (-)
G661400 NA non-coding upstream 17652 88995303 ~ 88996741 (-)
G661414 NA non-coding upstream 51333 89028984 ~ 89029726 (-)
G661424 NA non-coding upstream 73852 89051503 ~ 89052352 (-)
G661454 NA non-coding upstream 143896 89121547 ~ 89125563 (-)
G661459 NA non-coding upstream 157903 89135554 ~ 89137567 (-)
G661128 NA other downstream 215996 88759493 ~ 88759938 (-)
LOC110528667 cenpp other downstream 1682179 87114104 ~ 87293966 (-)
G659824 NA other downstream 1968642 87003736 ~ 87007292 (-)
G659543 NA other downstream 2342078 86632407 ~ 86633856 (-)
G661426 LOC106583832 other upstream 75425 89053076 ~ 89061481 (-)
G661335 NA other upstream 119396 88831729 ~ 89104274 (-)
G661773 LOC106583842 other upstream 480500 89458151 ~ 89459700 (-)
G662321 NA other upstream 699438 89677089 ~ 89681607 (-)
G662500 iqsec1 other upstream 1184487 90162138 ~ 90162948 (-)

Expression


Co-expression Network