G661233


Basic Information

Item Value
gene id G661233
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 89022390 ~ 89022761 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752410
AGATTGAACAATGAGATATTTCACCAGATGTGTAAATGTGAAGCATCTGCTTgtcgtttccactcactaccaaatatggtagtgagaggaagcccagtggccggcagtggaAGAAGATGGAAGGAAATTGATTTTTGGggacattctgcacattttctcatcgatTAAATATTTGATCTGAATAacgttttctgttcccaaaactagaaccTGTTATGAACAGATATGACTAAGTTTAGTAGACTTTGCCCTTTGCCAACGTTTTAAAAAATTGCGTTGTTGATTGTAGTTATCGCACACATGCACTTCACAGAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752410 True 316 lncRNA 0.39 2 89022390 89022761

Neighbor

gene id symbol gene type direction distance location
LOC118965328 NA coding upstream 43796 88974702 ~ 89002957 (+)
LOC110510506 LOC106583833 coding upstream 47445 88853096 ~ 88974945 (+)
cass4 LOC106583834 coding upstream 170235 88790770 ~ 88852155 (+)
LOC110528691 LOC106583835 coding upstream 240618 88777804 ~ 88781772 (+)
pdrg1 pdrg1 coding upstream 495944 88517435 ~ 88528083 (+)
LOC118965329 NA coding downstream 31386 89053940 ~ 89055968 (+)
ptpdc1a LOC106583842 coding downstream 376114 89398875 ~ 89474883 (+)
LOC110529066 LOC106583848 coding downstream 457076 89479837 ~ 89492439 (+)
iqsec1b iqsec1 coding downstream 1073261 90096022 ~ 90162648 (+)
pparg LOC106583866 coding downstream 1267340 90290101 ~ 90409035 (+)
G661229 NA non-coding upstream 5206 89014841 ~ 89017184 (+)
G661208 NA non-coding upstream 87353 88934778 ~ 88935037 (+)
G661203 NA non-coding upstream 112662 88906913 ~ 88909728 (+)
G661197 LOC106562215 non-coding upstream 121034 88896706 ~ 88901356 (+)
G661235 NA non-coding downstream 1540 89024301 ~ 89025240 (+)
G661234 NA non-coding downstream 1940 89024701 ~ 89027124 (+)
G661239 NA non-coding downstream 16666 89039427 ~ 89040090 (+)
G661251 NA non-coding downstream 34011 89056772 ~ 89057049 (+)
G661172 NA other upstream 46560 88972984 ~ 88975830 (+)
G661162 NA other upstream 204735 88817085 ~ 88817655 (+)
G660886 NA other upstream 328314 88691894 ~ 88694076 (+)
G660853 NA other upstream 333048 88622313 ~ 88689342 (+)
G661489 NA other downstream 156532 89179293 ~ 89180204 (+)
G661491 NA other downstream 158053 89180814 ~ 89182037 (+)
G661541 NA other downstream 232999 89255760 ~ 89256424 (+)
G661692 NA other downstream 445223 89467984 ~ 89471391 (+)
G661696 NA other downstream 447068 89469829 ~ 89470119 (+)

Expression


Co-expression Network