G661424


Basic Information

Item Value
gene id G661424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 89051503 ~ 89052352 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752662
TGACAACAGTCTGAGCTGTACGTTCATAGACCCGTTAGTAACCCAGTTCACTACAACAACCATAATGCAGCAGGTCATGTCTGTACTGTAACTATAAAGGGCTCTGCAAACAGAGCGTTGTATATGGTCCCAAAAAGTATGCTGCACAacgtagtgtagtgtgtagagtgtagagtgtgtagagtgtagagtgtgtagagtagagtgtagactgtagtgtgtagACTGTAGAGTGTAGTGCGTAGAGTGTAGTGTGCAGAGTGTGTAGTGTAGACTGTGTAGTGTAGAGTGTGCAGTGTAGACTGTGTAGATACATGGACTGGTACCAtacgtatctagatacatggACTGTTACCATACAGGAACCATACGCATCTAGATACATGGACTGGTACCATACAGGAACCAtacgtatctagatacatggACTGGTACCATACAGGAACCATATATATCTAGATACATGGACTGGTACCAtacgtatctagatacatggactggtaccatacaggaaccatacgtatctagatacatggACTGATACCATACAGGAACCAtacgtatctagatacatggACTGATACCATACAGGAACCAtacgtatctagatacatggactggtaccatacaggaaccatacgtatctagatacatggactggtaccatacaggaaccatacgtatctagatacatggactggtaccatacaggaaccatacgtatctagatacatggactggtaccatacaggaaccatacgtatctagatacatggACTGGTACCACACAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752662 True 793 lncRNA 0.43 3 89051503 89052352

Neighbor

gene id symbol gene type direction distance location
pdcd2l LOC106583835 coding downstream 272033 88777751 ~ 88779470 (-)
LOC110528689 NA coding downstream 408954 88585172 ~ 88642549 (-)
dyrk3 LOC106583824 coding downstream 597413 88421430 ~ 88454090 (-)
LOC118965327 NA coding downstream 631903 88417178 ~ 88420395 (-)
LOC110528687 LOC106583825 coding downstream 705758 88253063 ~ 88345745 (-)
LOC110528694 LOC106583841 coding upstream 336441 89388793 ~ 89392239 (-)
LOC110528698 wnt7a coding upstream 535745 89588097 ~ 89672181 (-)
LOC110528697 LOC107727849 coding upstream 647260 89699612 ~ 89827294 (-)
hdac11 hdac11 coding upstream 834220 89886572 ~ 89946188 (-)
LOC118965398 NA coding upstream 1207301 90259653 ~ 90259806 (-)
G661414 NA non-coding downstream 21777 89028984 ~ 89029726 (-)
G661400 NA non-coding downstream 54762 88995303 ~ 88996741 (-)
G661390 NA non-coding downstream 73852 88975934 ~ 88977651 (-)
G661389 NA non-coding downstream 75661 88972488 ~ 88975842 (-)
G661377 LOC106583833 non-coding downstream 119515 88920890 ~ 88931988 (-)
G661454 NA non-coding upstream 69195 89121547 ~ 89125563 (-)
G661459 NA non-coding upstream 83202 89135554 ~ 89137567 (-)
G661487 NA non-coding upstream 124849 89177201 ~ 89177619 (-)
G661498 yo84 non-coding upstream 137580 89189932 ~ 89190149 (-)
G661503 NA non-coding upstream 139683 89192035 ~ 89192240 (-)
G661128 NA other downstream 291565 88759493 ~ 88759938 (-)
LOC110528667 cenpp other downstream 1757748 87114104 ~ 87293966 (-)
G659824 NA other downstream 2044211 87003736 ~ 87007292 (-)
G659543 NA other downstream 2417647 86632407 ~ 86633856 (-)
G661426 LOC106583832 other upstream 724 89053076 ~ 89061481 (-)
G661335 NA other upstream 44695 88831729 ~ 89104274 (-)
G661773 LOC106583842 other upstream 405799 89458151 ~ 89459700 (-)
G662321 NA other upstream 624737 89677089 ~ 89681607 (-)
G662500 iqsec1 other upstream 1109786 90162138 ~ 90162948 (-)

Expression


Co-expression Network