G661258


Basic Information

Item Value
gene id G661258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 89066262 ~ 89069366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752440
actatatcaaaactacacctaaactatatcaaaactacacctaaactGCACCTAAACTATACTAAAACTACATctaaactatatcaaaactacaTCGAAACTACATCTAAACTATATTAAAACCTCATctaaactatatcaaaactacatctaaactatatcaaaactacatctaaactatatcaaaactacatctaaactatatcaaaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106609981 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752440 True 211 lncRNA 0.26 3 89066262 89069366

Neighbor

gene id symbol gene type direction distance location
LOC118965329 NA coding upstream 10294 89053940 ~ 89055968 (+)
LOC118965328 NA coding upstream 87668 88974702 ~ 89002957 (+)
LOC110510506 LOC106583833 coding upstream 91317 88853096 ~ 88974945 (+)
cass4 LOC106583834 coding upstream 214107 88790770 ~ 88852155 (+)
LOC110528691 LOC106583835 coding upstream 284490 88777804 ~ 88781772 (+)
ptpdc1a LOC106583842 coding downstream 329509 89398875 ~ 89474883 (+)
LOC110529066 LOC106583848 coding downstream 410471 89479837 ~ 89492439 (+)
iqsec1b iqsec1 coding downstream 1026656 90096022 ~ 90162648 (+)
pparg LOC106583866 coding downstream 1220735 90290101 ~ 90409035 (+)
tsen2 tsen2 coding downstream 1344353 90413719 ~ 90459450 (+)
G661251 NA non-coding upstream 9213 89056772 ~ 89057049 (+)
G661239 NA non-coding upstream 26172 89039427 ~ 89040090 (+)
G661234 NA non-coding upstream 39138 89024701 ~ 89027124 (+)
G661235 NA non-coding upstream 41022 89024301 ~ 89025240 (+)
G661155 NA non-coding downstream 23517 89092883 ~ 89098386 (+)
G661272 NA non-coding downstream 26467 89095833 ~ 89096435 (+)
G661291 NA non-coding downstream 72665 89142031 ~ 89161889 (+)
G661304 NA non-coding downstream 92994 89162360 ~ 89162805 (+)
G661500 NA non-coding downstream 121695 89191061 ~ 89191267 (+)
G661172 NA other upstream 90432 88972984 ~ 88975830 (+)
G661162 NA other upstream 248607 88817085 ~ 88817655 (+)
G660886 NA other upstream 372186 88691894 ~ 88694076 (+)
G660853 NA other upstream 376920 88622313 ~ 88689342 (+)
G661489 NA other downstream 109927 89179293 ~ 89180204 (+)
G661491 NA other downstream 111448 89180814 ~ 89182037 (+)
G661541 NA other downstream 186394 89255760 ~ 89256424 (+)
G661692 NA other downstream 398618 89467984 ~ 89471391 (+)
G661696 NA other downstream 400463 89469829 ~ 89470119 (+)

Expression


Co-expression Network