G661291


Basic Information

Item Value
gene id G661291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 89142031 ~ 89161889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752485
atgtatatactgtactctatatcatctactgcatctttatgtaatacatgtatcactagccactttaactatgccactttgtttacatactcacctcatgtatatactgtactcgataccatctactgtatcctgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtataagacagtagttttggaattgttagttagattacttgttggttattactgcattgtcggaactagaagcacaagcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttgatttgaagtgtgattgacttggagttacattgtgttgtttaagttttccctttatttttttgagcagtgtatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752485 True 405 lncRNA 0.33 2 89142031 89161889

Neighbor

gene id symbol gene type direction distance location
LOC110529064 phf2 coding upstream 26506 88981718 ~ 89115525 (+)
LOC118965329 NA coding upstream 86063 89053940 ~ 89055968 (+)
LOC118965328 NA coding upstream 163437 88974702 ~ 89002957 (+)
LOC110510506 LOC106583833 coding upstream 167086 88853096 ~ 88974945 (+)
cass4 LOC106583834 coding upstream 289876 88790770 ~ 88852155 (+)
ptpdc1a LOC106583842 coding downstream 236986 89398875 ~ 89474883 (+)
LOC110529066 LOC106583848 coding downstream 317948 89479837 ~ 89492439 (+)
iqsec1b iqsec1 coding downstream 934133 90096022 ~ 90162648 (+)
pparg LOC106583866 coding downstream 1128212 90290101 ~ 90409035 (+)
tsen2 tsen2 coding downstream 1251830 90413719 ~ 90459450 (+)
G661155 NA non-coding upstream 43645 89092883 ~ 89098386 (+)
G661272 NA non-coding upstream 45596 89095833 ~ 89096435 (+)
G661258 NA non-coding upstream 72665 89066262 ~ 89069366 (+)
G661257 NA non-coding upstream 75619 89065721 ~ 89066412 (+)
G661251 NA non-coding upstream 84982 89056772 ~ 89057049 (+)
G661304 NA non-coding downstream 471 89162360 ~ 89162805 (+)
G661500 NA non-coding downstream 29172 89191061 ~ 89191267 (+)
G661511 NA non-coding downstream 37585 89199474 ~ 89200032 (+)
G661520 NA non-coding downstream 47657 89209546 ~ 89209805 (+)
G661559 NA non-coding downstream 142318 89304207 ~ 89311567 (+)
G661172 NA other upstream 166201 88972984 ~ 88975830 (+)
G661162 NA other upstream 324376 88817085 ~ 88817655 (+)
G660886 NA other upstream 447955 88691894 ~ 88694076 (+)
G660853 NA other upstream 452689 88622313 ~ 88689342 (+)
G661489 NA other downstream 17404 89179293 ~ 89180204 (+)
G661491 NA other downstream 18925 89180814 ~ 89182037 (+)
G661541 NA other downstream 93871 89255760 ~ 89256424 (+)
G661692 NA other downstream 306095 89467984 ~ 89471391 (+)
G661696 NA other downstream 307940 89469829 ~ 89470119 (+)

Expression


Co-expression Network