G661304


Basic Information

Item Value
gene id G661304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 89162360 ~ 89162805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752499
gctgtatggaaaggtactgctctgtttcagctggtatggtcagtctagctgtatggagaaggtactgtttcagctgttatggtcagtctagctgtatggagaaggtactgctctgtttcagctgttatggtcagtctagctgtatggagaatgtactgtttcagctggtatggtcagtctagctgtatagagaatgtactgctctgtttcagctgttatggtcagtctagctgtatggagaatgtactgtttcagctggtatgg
>TU752500
gctgtatggaaaggtactgctctgtttcagctggtatggtcagtctagctgtatggagaaggtactgtttcagctgttatggtcagtctagctgtatggagaaggtactgtttcagctggtatggtcagtctagctgtatggagaaggtactgctctgtttcagctgttatggtcagtctagctgtatggagaatgtactgtttcagctggtatggtcagtctagctgtatagagaatgtactgctctgtttcagctgttatggtcagtctagctgtatggagaatgtactgtttcagctggtatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752499 False 264 lncRNA 0.45 2 89162360 89162805
TU752500 True 307 lncRNA 0.45 2 89162360 89162805

Neighbor

gene id symbol gene type direction distance location
LOC110529064 phf2 coding upstream 46835 88981718 ~ 89115525 (+)
LOC118965329 NA coding upstream 106392 89053940 ~ 89055968 (+)
LOC118965328 NA coding upstream 183766 88974702 ~ 89002957 (+)
LOC110510506 LOC106583833 coding upstream 187415 88853096 ~ 88974945 (+)
cass4 LOC106583834 coding upstream 310205 88790770 ~ 88852155 (+)
ptpdc1a LOC106583842 coding downstream 236070 89398875 ~ 89474883 (+)
LOC110529066 LOC106583848 coding downstream 317032 89479837 ~ 89492439 (+)
iqsec1b iqsec1 coding downstream 933217 90096022 ~ 90162648 (+)
pparg LOC106583866 coding downstream 1127296 90290101 ~ 90409035 (+)
tsen2 tsen2 coding downstream 1250914 90413719 ~ 90459450 (+)
G661291 NA non-coding upstream 471 89142031 ~ 89161889 (+)
G661155 NA non-coding upstream 63974 89092883 ~ 89098386 (+)
G661272 NA non-coding upstream 65925 89095833 ~ 89096435 (+)
G661258 NA non-coding upstream 92994 89066262 ~ 89069366 (+)
G661257 NA non-coding upstream 95948 89065721 ~ 89066412 (+)
G661500 NA non-coding downstream 28256 89191061 ~ 89191267 (+)
G661511 NA non-coding downstream 36669 89199474 ~ 89200032 (+)
G661520 NA non-coding downstream 46741 89209546 ~ 89209805 (+)
G661559 NA non-coding downstream 141402 89304207 ~ 89311567 (+)
G661562 NA non-coding downstream 157964 89320769 ~ 89321532 (+)
G661172 NA other upstream 186530 88972984 ~ 88975830 (+)
G661162 NA other upstream 344705 88817085 ~ 88817655 (+)
G660886 NA other upstream 468284 88691894 ~ 88694076 (+)
G660853 NA other upstream 473018 88622313 ~ 88689342 (+)
G661489 NA other downstream 16488 89179293 ~ 89180204 (+)
G661491 NA other downstream 18009 89180814 ~ 89182037 (+)
G661541 NA other downstream 92955 89255760 ~ 89256424 (+)
G661692 NA other downstream 305179 89467984 ~ 89471391 (+)
G661696 NA other downstream 307024 89469829 ~ 89470119 (+)

Expression


Co-expression Network