G661491



Basic Information


Item Value
gene id G661491
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 89180814 ~ 89182037 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU752742
ccagcagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagatggtgaggaaaccaacagtggagacagtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacagtgaggaaaccagcagtggagatggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccagcagtggagacagtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagatggtgaggaaaccagcagtggagacagtgaggaaaccagcagtggagacagtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacagtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagatggtgaggaaaccaacagtggagacggtgaggaaaccagcagtggagacggtgaggaaaccaacagtggagacagtgaggaaaccaacagtggagacggtgaggaaaccaacagtggagacagTGAGGAAACCAGCAGTGGAGACAGTGAGGAAA

Function


NR:

description
PREDICTED: ice nucleation protein-like isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU752742 True 1224 TUCP 0.55 1 89180814 89182037

Neighbor


gene id symbol gene type direction distance location
LOC110529064 phf2 coding upstream 65289 88981718 ~ 89115525 (+)
LOC118965329 NA coding upstream 124846 89053940 ~ 89055968 (+)
LOC118965328 NA coding upstream 202220 88974702 ~ 89002957 (+)
LOC110510506 LOC106583833 coding upstream 205869 88853096 ~ 88974945 (+)
cass4 LOC106583834 coding upstream 328659 88790770 ~ 88852155 (+)
ptpdc1a LOC106583842 coding downstream 216838 89398875 ~ 89474883 (+)
LOC110529066 LOC106583848 coding downstream 297800 89479837 ~ 89492439 (+)
iqsec1b iqsec1 coding downstream 913985 90096022 ~ 90162648 (+)
pparg LOC106583866 coding downstream 1108064 90290101 ~ 90409035 (+)
tsen2 tsen2 coding downstream 1231682 90413719 ~ 90459450 (+)
G661304 NA non-coding upstream 18009 89162360 ~ 89162805 (+)
G661291 NA non-coding upstream 18925 89142031 ~ 89161889 (+)
G661155 NA non-coding upstream 82428 89092883 ~ 89098386 (+)
G661272 NA non-coding upstream 84379 89095833 ~ 89096435 (+)
G661258 NA non-coding upstream 111448 89066262 ~ 89069366 (+)
G661500 NA non-coding downstream 9024 89191061 ~ 89191267 (+)
G661511 NA non-coding downstream 17437 89199474 ~ 89200032 (+)
G661520 NA non-coding downstream 27509 89209546 ~ 89209805 (+)
G661559 NA non-coding downstream 122170 89304207 ~ 89311567 (+)
G661562 NA non-coding downstream 138732 89320769 ~ 89321532 (+)
G661489 NA other upstream 610 89179293 ~ 89180204 (+)
G661172 NA other upstream 204984 88972984 ~ 88975830 (+)
G661162 NA other upstream 363159 88817085 ~ 88817655 (+)
G660886 NA other upstream 486738 88691894 ~ 88694076 (+)
G661541 NA other downstream 73723 89255760 ~ 89256424 (+)
G661692 NA other downstream 285947 89467984 ~ 89471391 (+)
G661696 NA other downstream 287792 89469829 ~ 89470119 (+)
G662026 NA other downstream 817240 89999277 ~ 89999911 (+)
LOC110528704 cnbp other downstream 1336848 90518807 ~ 90562974 (+)

Expression



Co-expression Network