G661500


Basic Information

Item Value
gene id G661500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 89191061 ~ 89191267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU752752
gatcaaatcaaatcaaatgttatttgtcacatacacatggttagcagatgttaatgcgagtgtagagaaatgcttgtacttctagttccgacaatgcagtatacccaacaagtaatctagctaacaattccaaaactactgtcttgtacacagtgtaaggggataaagaatatgtacataaagatacatgaatgagtgatgttacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU752752 True 207 lncRNA 0.35 1 89191061 89191267

Neighbor

gene id symbol gene type direction distance location
LOC110529064 phf2 coding upstream 75536 88981718 ~ 89115525 (+)
LOC118965329 NA coding upstream 135093 89053940 ~ 89055968 (+)
LOC118965328 NA coding upstream 212467 88974702 ~ 89002957 (+)
LOC110510506 LOC106583833 coding upstream 216116 88853096 ~ 88974945 (+)
cass4 LOC106583834 coding upstream 338906 88790770 ~ 88852155 (+)
ptpdc1a LOC106583842 coding downstream 207608 89398875 ~ 89474883 (+)
LOC110529066 LOC106583848 coding downstream 288570 89479837 ~ 89492439 (+)
iqsec1b iqsec1 coding downstream 904755 90096022 ~ 90162648 (+)
pparg LOC106583866 coding downstream 1098834 90290101 ~ 90409035 (+)
tsen2 tsen2 coding downstream 1222452 90413719 ~ 90459450 (+)
G661304 NA non-coding upstream 28256 89162360 ~ 89162805 (+)
G661291 NA non-coding upstream 29172 89142031 ~ 89161889 (+)
G661155 NA non-coding upstream 92675 89092883 ~ 89098386 (+)
G661272 NA non-coding upstream 94626 89095833 ~ 89096435 (+)
G661258 NA non-coding upstream 121695 89066262 ~ 89069366 (+)
G661511 NA non-coding downstream 8207 89199474 ~ 89200032 (+)
G661520 NA non-coding downstream 18279 89209546 ~ 89209805 (+)
G661559 NA non-coding downstream 112940 89304207 ~ 89311567 (+)
G661562 NA non-coding downstream 129502 89320769 ~ 89321532 (+)
G661631 NA non-coding downstream 176106 89367373 ~ 89368412 (+)
G661491 NA other upstream 9024 89180814 ~ 89182037 (+)
G661489 NA other upstream 10857 89179293 ~ 89180204 (+)
G661172 NA other upstream 215231 88972984 ~ 88975830 (+)
G661162 NA other upstream 373406 88817085 ~ 88817655 (+)
G661541 NA other downstream 64493 89255760 ~ 89256424 (+)
G661692 NA other downstream 276717 89467984 ~ 89471391 (+)
G661696 NA other downstream 278562 89469829 ~ 89470119 (+)
G662026 NA other downstream 808010 89999277 ~ 89999911 (+)
LOC110528704 cnbp other downstream 1327618 90518807 ~ 90562974 (+)

Expression


Co-expression Network