Gene
RNA
| Item | Value |
|---|---|
| gene id | G661773 |
| gene name | LOC106583842 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 89458151 ~ 89459700 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein tyrosine phosphatase domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU753077 | True | 1480 | TUCP | 0.60 | 2 | 89458151 | 89459700 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528694 | LOC106583841 | coding | downstream | 65912 | 89388793 ~ 89392239 (-) |
| pdcd2l | LOC106583835 | coding | downstream | 678681 | 88777751 ~ 88779470 (-) |
| LOC110528689 | NA | coding | downstream | 815602 | 88585172 ~ 88642549 (-) |
| dyrk3 | LOC106583824 | coding | downstream | 1004061 | 88421430 ~ 88454090 (-) |
| LOC118965327 | NA | coding | downstream | 1038551 | 88417178 ~ 88420395 (-) |
| LOC110528698 | wnt7a | coding | upstream | 128397 | 89588097 ~ 89672181 (-) |
| LOC110528697 | LOC107727849 | coding | upstream | 239912 | 89699612 ~ 89827294 (-) |
| hdac11 | hdac11 | coding | upstream | 426872 | 89886572 ~ 89946188 (-) |
| LOC118965398 | NA | coding | upstream | 799953 | 90259653 ~ 90259806 (-) |
| LOC118965428 | NA | coding | upstream | 801230 | 90260930 ~ 90261083 (-) |
| G661760 | NA | non-coding | downstream | 28511 | 89429332 ~ 89429640 (-) |
| G661758 | NA | non-coding | downstream | 29953 | 89427903 ~ 89428198 (-) |
| G661757 | NA | non-coding | downstream | 30370 | 89427545 ~ 89427781 (-) |
| G661756 | NA | non-coding | downstream | 32466 | 89425413 ~ 89425685 (-) |
| G661754 | NA | non-coding | downstream | 41558 | 89416381 ~ 89416593 (-) |
| G661775 | NA | non-coding | upstream | 2525 | 89462225 ~ 89471122 (-) |
| G661780 | NA | non-coding | upstream | 17016 | 89476716 ~ 89478355 (-) |
| G661831 | NA | non-coding | upstream | 116144 | 89575844 ~ 89576055 (-) |
| G661834 | NA | non-coding | upstream | 118878 | 89578578 ~ 89579330 (-) |
| G661836 | NA | non-coding | upstream | 119721 | 89579421 ~ 89579886 (-) |
| G661335 | NA | other | downstream | 359573 | 88831729 ~ 89104274 (-) |
| G661426 | LOC106583832 | other | downstream | 396670 | 89053076 ~ 89061481 (-) |
| G661128 | NA | other | downstream | 698213 | 88759493 ~ 88759938 (-) |
| LOC110528687 | LOC106583825 | other | downstream | 1198746 | 88253063 ~ 88345745 (-) |
| LOC110528667 | cenpp | other | downstream | 2164396 | 87114104 ~ 87293966 (-) |
| G662321 | NA | other | upstream | 217389 | 89677089 ~ 89681607 (-) |
| G662500 | iqsec1 | other | upstream | 702438 | 90162138 ~ 90162948 (-) |
| G662629 | NA | other | upstream | 992587 | 90452079 ~ 90453988 (-) |
| G662819 | NA | other | upstream | 1282892 | 90742592 ~ 90764290 (-) |
