G661773 (LOC106583842)


Basic Information

Item Value
gene id G661773
gene name LOC106583842
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 89458151 ~ 89459700 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU753077
GCCACACTGAGACCTTGTAGTGGAGATCTTCATCATTCAGGCCCAAAGCCAGAGCTCTGGCCACCAGCAGACGTCTGGCTTCCAGGGACAGCTCAGCATACAGGGTGATGACAGGGACCTCTGTcagcctctccctgtcctctctgtccttccgttcctctctgtcctctctttctccagccttccccctcactctttcctctctgtctccagcccTGTCTACCCCACACAcagactcctctcctcctgtaaGGCTCATCACAGGCATATCTCCTCTCCACGGCCTCCCCTCTGACAGCTCTTCTCCTGAGGGCTTGGACAGACTACCCCCAAACCCAAAGGACAGACTTCGCTGGCCCTCGCAGAGCTGCTTCCGTCTCTGGAAGAGAGGAGACATGTTCTTCTGGGTGTGGTGATCACTCTCCTTAGAACTCCTTTCCTgtcctcctcgcctctcctccctTGTCTGCTCTCCCATGGAGAAGGGGTGGTGCTGTGGAGGGAGGCTAGGGGATGTGGGGGGCTCCCAGGCTGTGGCTAGCTGGTGATGGGTCAGAGGATTGCCGCAAGGGATGCTCCAGATGTGGTTCTGGTTCTGCTCCTGGTCTGGGTCTCGTCTGGGGTCTAGCTTATACAAGGCTGAGTCACTGTAACTCAGCAAGCGTTTCCCCGGATGCAGAGGCTTCAGGAGGGAGGCAGCCACCCCATTCTGCCGCTGCCACAGAGGGTCCAGCTCCTTGTCACTGGACAGAACCGGGTCGTGGGCCAGGGCTGGGCTGAGAGGGGGCTCTAAGAGTAACGATGGTTCCTGGAGTAGTGCTAGGTTTGGAGTGAGAGGTCGTTCCATGTGTAGTGTGTGGGTTAGGGCTGTCTGAGGGCGGGGACAAGGCTGGGTTAGGGCTGTCTCAGGGCGGGGACAAGGCTGGGTTAGGGCTGTCTCAGGGTGGGGACAAGGCTGGGTTAGGGCTGTCTCAGGGTGGGGACAAGGCTGGGTTAGGGCTGTCTCAGGGCGGGGACAAGGCTGGGTTAGGGCTGTCTCAGGGCGGGGACAAGGCTGGGTTAGGGCTGTCTCAGGGCGGGGACAAGGCTGGGTTAGGGCTGTCTCAGGGCAGGGACAAGGCTGGGTTAGGGCTGTCTCAGGGTGGGGACAAGGCTGGGTTAGGGCTGTCTCAGGGCGGGGACAAGGCTGGGTTAGGGCTGTCTCGTGGCGGGGACAAGGCAGGCAGGGTGAAGGCACAGGGATGCccttccctctcatctccttccccAGCAGCTGGATGGCCTGCTGGGACACTGTCTTCTCCACCTCCGCCGTCAGGTCTGGAACCTCCACCAccgcctcctccaccaccaccttcaatcacatcatcatcatcatcaacagtcAGGTCTGGAACCTCCACCAccgcctcctccaccaccaccttcaatcacatcatcatcatcatcatcatcaatagtcaggtctggaacctccacc

Function

NR:

description
PREDICTED: protein tyrosine phosphatase domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU753077 True 1480 TUCP 0.60 2 89458151 89459700

Neighbor

gene id symbol gene type direction distance location
LOC110528694 LOC106583841 coding downstream 65912 89388793 ~ 89392239 (-)
pdcd2l LOC106583835 coding downstream 678681 88777751 ~ 88779470 (-)
LOC110528689 NA coding downstream 815602 88585172 ~ 88642549 (-)
dyrk3 LOC106583824 coding downstream 1004061 88421430 ~ 88454090 (-)
LOC118965327 NA coding downstream 1038551 88417178 ~ 88420395 (-)
LOC110528698 wnt7a coding upstream 128397 89588097 ~ 89672181 (-)
LOC110528697 LOC107727849 coding upstream 239912 89699612 ~ 89827294 (-)
hdac11 hdac11 coding upstream 426872 89886572 ~ 89946188 (-)
LOC118965398 NA coding upstream 799953 90259653 ~ 90259806 (-)
LOC118965428 NA coding upstream 801230 90260930 ~ 90261083 (-)
G661760 NA non-coding downstream 28511 89429332 ~ 89429640 (-)
G661758 NA non-coding downstream 29953 89427903 ~ 89428198 (-)
G661757 NA non-coding downstream 30370 89427545 ~ 89427781 (-)
G661756 NA non-coding downstream 32466 89425413 ~ 89425685 (-)
G661754 NA non-coding downstream 41558 89416381 ~ 89416593 (-)
G661775 NA non-coding upstream 2525 89462225 ~ 89471122 (-)
G661780 NA non-coding upstream 17016 89476716 ~ 89478355 (-)
G661831 NA non-coding upstream 116144 89575844 ~ 89576055 (-)
G661834 NA non-coding upstream 118878 89578578 ~ 89579330 (-)
G661836 NA non-coding upstream 119721 89579421 ~ 89579886 (-)
G661335 NA other downstream 359573 88831729 ~ 89104274 (-)
G661426 LOC106583832 other downstream 396670 89053076 ~ 89061481 (-)
G661128 NA other downstream 698213 88759493 ~ 88759938 (-)
LOC110528687 LOC106583825 other downstream 1198746 88253063 ~ 88345745 (-)
LOC110528667 cenpp other downstream 2164396 87114104 ~ 87293966 (-)
G662321 NA other upstream 217389 89677089 ~ 89681607 (-)
G662500 iqsec1 other upstream 702438 90162138 ~ 90162948 (-)
G662629 NA other upstream 992587 90452079 ~ 90453988 (-)
G662819 NA other upstream 1282892 90742592 ~ 90764290 (-)

Expression


Co-expression Network