XLOC_025693


Basic Information

Item Value
gene id XLOC_025693
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 48040338 ~ 48041913 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052779
cctgaaccagctaattaaagTCTTACTAGGCATACTAGAAAATTCCAGTCAGGTGCGTTCAGGCAAACTATAACTAAACTCTACAGgataccagccctccaggactgagtttggacacccctgccagtTTTATAGAAAGTAGTTTAAGCTTCTTGATTGATTTGTTATACAGCGCTACAAGCACCTAGGAAGAACACAATCTTCCACTCCCAAACGAGCTAATAATTTTCCATAAACCACTCAAAAGAATGAAACTAATAAAGCTCTCACAATGAACACCGCTTTCGAATCATGGAAATTCGAGCGAGCCCAGCAGCGGTGAGACGATTCTGCACAGATGAAGGGTTTGCGTAGATAACATCAGGCGCTTTTCCAGgAGCGGATGATGAGGTGGTATTACATGGCCGGATCCCAATCAGAGAGAGAGGATCCAATCAATCATTCTGTTATCTGCGCTCTGCTCTTCTATTACTCGCGTGGCGGGCTACTAAGTCCTGGCTTTGAGTGTGCGAGTGGCAGTAGCTGCGCCTGTCATTCGGGTGCTGTAGATTAATGGGAAGCCTGTCGTGGTGTTTAATGTGTTTAATATGGGCCGCCGATGAGGCCGTTACACAAATGCCTCCGCCCGTCATCTGCACCCTCTGAATGATGGAGTCACCTGTGCCACACACTGCGCCAAACTGACATGCCAGatagattaaaaaaagaagactATTCTGACTTCAATAATATACACGGCCAGTTCTCTAATTGAGGGATTTATTTGTGAAGAAAGAATTATCTCATTCATTTACTttagtcatacacacacacacacacacacacgttacatGCAGTTTGCCTGAGCTGTGTGTTAACGGTGACAGCAGGTGGCTTGATGCAGCAAAGAAGACCTTAAAAACTCAAAATGTTAAAATTTGTGAACTATAATTGAGAGTCATTTGCCAGATAGTTAAATATTTAGCTTATCTATTAATCTTTTTTGCGTACCTTTGCTCACATGCCTGTTAACAGGATGTTAATTAGAAAGGTTTCGCCCTGCTCTCAACCAAGCGCTTTTTTTTATCtccgatttttatttatttttttatgttcattgACATGAGGTTTTAATATTGACATGgggtttaatatttaaataaatttagctCAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052779 True 1153 lncRNA 0.42 2 48040338 48041913

Neighbor

gene id symbol gene type direction distance location
XLOC_025692 LO018532.1 coding upstream 485561 47552353 ~ 47554777 (+)
XLOC_025691 NA coding upstream 541995 47494522 ~ 47498343 (+)
XLOC_025690 AL928740.1 coding upstream 579735 47460488 ~ 47460603 (+)
XLOC_025689 NA coding upstream 630939 47395535 ~ 47409399 (+)
XLOC_025688 ppap2d coding upstream 652961 47322494 ~ 47387377 (+)
XLOC_025694 si:ch211-207b24.4 coding downstream 164556 48206469 ~ 48215187 (+)
XLOC_025695 fn3krp coding downstream 179500 48221413 ~ 48229972 (+)
XLOC_025696 tbcd coding downstream 192532 48234445 ~ 48327160 (+)
XLOC_025697 NA coding downstream 397153 48439066 ~ 48442896 (+)
XLOC_025698 NA coding downstream 422926 48464839 ~ 48467557 (+)
XLOC_025429 BX649540.1 misc upstream 17791302 30248739 ~ 30249036 (+)
XLOC_025685 NA non-coding upstream 930865 47107770 ~ 47109473 (+)
XLOC_025684 NA non-coding upstream 1201700 46834857 ~ 46838638 (+)
XLOC_025701 NA non-coding downstream 576248 48618161 ~ 48629771 (+)
XLOC_025703 NA non-coding downstream 852554 48894467 ~ 48907830 (+)
XLOC_025704 NA non-coding downstream 956978 48998891 ~ 49006665 (+)

Expression


Co-expression Network