XLOC_025698


Basic Information

Item Value
gene id XLOC_025698
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 48464839 ~ 48467557 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052781
TTCTTCCTTTAAGTAAACACAGAGAGGCAGAGTCAGCCAAAACAGAGAATGAGCTCCTCAAATGCTAAACACAATCATTTCTAGCAATCAGAAGTCAGAAATGTGGCTTTTCATGAGCTCCACTGAGGATTATGAAGCCCAAGATGAACTGTATAAATGAAGTGTTTACATACTGTACACATGCGTCGTGTTATAGAAGATCTGTCGCCACACAGAGAGGGAATAATAGGAGGAACCATCTGCAGGTGTCTCTGTGCTGTGGTTGGCCTGTCCTGACATGCACATTGTTCAGGTTTAAGTTTTGGGATGATCCTGAGAGGCAGTGGTAGGCCGGCAGTGTGTCTGTATTGAATTCGGATGGTTGTCCTAACCTTCGTATTCTCCTCTTTTTCCATGGACATCCCTTATATGCCTTCAGATCCTTCACACTGATCAAGGGAAGGGTTACATGGTGTAGAAGATC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052781 True 463 lncRNA 0.44 2 48464839 48467557

Neighbor

gene id symbol gene type direction distance location
XLOC_025697 NA coding upstream 21943 48439066 ~ 48442896 (+)
XLOC_025696 tbcd coding upstream 137679 48234445 ~ 48327160 (+)
XLOC_025695 fn3krp coding upstream 234867 48221413 ~ 48229972 (+)
XLOC_025694 si:ch211-207b24.4 coding upstream 249652 48206469 ~ 48215187 (+)
XLOC_025693 NA coding upstream 422926 48040338 ~ 48041913 (+)
XLOC_025699 metrnla coding downstream 5789 48473346 ~ 48489887 (+)
XLOC_025700 slc16a5b coding downstream 93555 48561112 ~ 48578458 (+)
XLOC_025701 NA coding downstream 150604 48618161 ~ 48629771 (+)
XLOC_025702 hs3st3b1a coding downstream 375361 48842918 ~ 48869632 (+)
XLOC_025703 NA coding downstream 426910 48894467 ~ 48907830 (+)
XLOC_025429 BX649540.1 misc upstream 18215803 30248739 ~ 30249036 (+)
XLOC_025691 NA non-coding upstream 966496 47494522 ~ 47498343 (+)
XLOC_025690 AL928740.1 non-coding upstream 1004236 47460488 ~ 47460603 (+)
XLOC_025689 NA non-coding upstream 1055440 47395535 ~ 47409399 (+)
XLOC_025704 NA non-coding downstream 531334 48998891 ~ 49006665 (+)
XLOC_025709 BX649515.1 non-coding downstream 664784 49132341 ~ 49132477 (+)
XLOC_025710 NA non-coding downstream 666825 49134382 ~ 49134743 (+)

Expression


Co-expression Network