XLOC_025703


Basic Information

Item Value
gene id XLOC_025703
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 48894467 ~ 48907830 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052784
ATTGTCTCTGACAGAGGTGGGCAGAATGTAGTCTCAGAAAGGTGGAGGTGTCTCTCAATTTCAATGAGAGGTATCTCTGTGTGCAGACCACAGATTTTTGAGAGATGATTCTGCCTGAGAACAGCTGATGGGAACAACAGAGATTGGGGTTAACTGCTCAGAGAAGTGACCAAGGAGATCTGGCGctgctgataaataaaaggatggAGGCCAAAGAGTTCGGGAGCTTTTGGACATCCAGACTGCTTGGCTGACGGTTCTTTAAAGATCCTGATCCAGGATCCTGATCTTCACTTTATTCACTTATGCTcgataaataaattgattgattttGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052784 True 335 lncRNA 0.44 2 48894467 48907830

Neighbor

gene id symbol gene type direction distance location
XLOC_025702 hs3st3b1a coding upstream 24835 48842918 ~ 48869632 (+)
XLOC_025701 NA coding upstream 264696 48618161 ~ 48629771 (+)
XLOC_025700 slc16a5b coding upstream 316009 48561112 ~ 48578458 (+)
XLOC_025699 metrnla coding upstream 404580 48473346 ~ 48489887 (+)
XLOC_025698 NA coding upstream 426910 48464839 ~ 48467557 (+)
XLOC_025704 NA coding downstream 91061 48998891 ~ 49006665 (+)
XLOC_025705 zgc:163083 coding downstream 113249 49021079 ~ 49024570 (+)
XLOC_025706 zgc:92161 coding downstream 136087 49043917 ~ 49058326 (+)
XLOC_025707 zgc:112146 coding downstream 166178 49074008 ~ 49079318 (+)
XLOC_025708 zgc:123284 coding downstream 189945 49097775 ~ 49100456 (+)
XLOC_025429 BX649540.1 misc upstream 18645431 30248739 ~ 30249036 (+)
XLOC_025697 NA non-coding upstream 451571 48439066 ~ 48442896 (+)
XLOC_025693 NA non-coding upstream 852554 48040338 ~ 48041913 (+)
XLOC_025691 NA non-coding upstream 1396124 47494522 ~ 47498343 (+)
XLOC_025709 BX649515.1 non-coding downstream 224511 49132341 ~ 49132477 (+)
XLOC_025710 NA non-coding downstream 226552 49134382 ~ 49134743 (+)
XLOC_025712 NA non-coding downstream 547932 49455762 ~ 49459924 (+)
XLOC_025713 NA non-coding downstream 582724 49490554 ~ 49506172 (+)

Expression


Co-expression Network