XLOC_025710


Basic Information

Item Value
gene id XLOC_025710
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 49134382 ~ 49134743 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052374
TTTAATGCAAAAGGTGTGTGCACAAGCTTTAATACCGTTCTTTATGTTCCCAAATCGAAGGAGAAATCTCTGCAATTCAACCCATTCAAATCTCCAGATCTATAATGCAAACAGAAACAGACTTTGatgaaaaagttttaaaaatattttttcgatataagaaaaaaaattgaggtaaagttggttttatattcacacattctgccATTTTAACGGTCTGTATATTGTTTACTACACTAACTTGAATATTCAGCACATATATAATACGcaatagcactatttaattgactgtgaacaatgttgtactttgagagtcattggctgataatataatttccctatttagaatttgcaaataatac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052374 True 362 lncRNA 0.30 1 49134382 49134743

Neighbor

gene id symbol gene type direction distance location
XLOC_025709 BX649515.1 coding upstream 1905 49132341 ~ 49132477 (+)
XLOC_025708 zgc:123284 coding upstream 33926 49097775 ~ 49100456 (+)
XLOC_025707 zgc:112146 coding upstream 55064 49074008 ~ 49079318 (+)
XLOC_025706 zgc:92161 coding upstream 76056 49043917 ~ 49058326 (+)
XLOC_025705 zgc:163083 coding upstream 109812 49021079 ~ 49024570 (+)
XLOC_025711 tecra coding downstream 262372 49397115 ~ 49421274 (+)
XLOC_025712 NA coding downstream 321019 49455762 ~ 49459924 (+)
XLOC_025713 NA coding downstream 355811 49490554 ~ 49506172 (+)
XLOC_025714 crb3a coding downstream 386363 49521106 ~ 49548229 (+)
XLOC_025715 NA coding downstream 430514 49565257 ~ 49624678 (+)
XLOC_025429 BX649540.1 misc upstream 18885346 30248739 ~ 30249036 (+)
XLOC_025704 NA non-coding upstream 127717 48998891 ~ 49006665 (+)
XLOC_025703 NA non-coding upstream 226552 48894467 ~ 48907830 (+)
XLOC_025701 NA non-coding upstream 504611 48618161 ~ 48629771 (+)
XLOC_025698 NA non-coding upstream 666825 48464839 ~ 48467557 (+)
XLOC_025716 NA non-coding downstream 619025 49753768 ~ 49760696 (+)
XLOC_025719 NA non-coding downstream 1152037 50286780 ~ 50288488 (+)

Expression


Co-expression Network