LOC110529313 (LOC106571113)


Basic Information

Item Value
gene id LOC110529313
gene name LOC106571113
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 8283880 ~ 8341125 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984665.1
GAAGGAGAAGATGAGACTGGTGATAGAGTTTTTATTAAAGCTAAATGATAGAGCTCATGAATGTGTTGCAAACAATACTGGTAACTCACTGCATGACTAAGTACCACTTCTGGTTATTTTTTCCATGCTGATGTTTCTTCCTCACAAAACATTCTGGTGGCATATGGTATCCCCATCAACACCTTCAGCTTTTGGAACTTTTCAAAGAATATAACTACTCAAACTTCCATCAGCTGTTACAGTGGCTACAAAAAAAGAGAAGAATCAGTTTGAATATTTCTTTTTTTAATAGTTGGATTTAGACGCCTTAGTTATTTTCCTCTGGAGCAGACACAGAATGTGTTTCTGGAGAGGTGTACAGATGTACTGTTTCCTGTCAACACTGAATGGCCACATTGTGTTGGACTAACACAGCATTACCTGGATTAGAGACAGATTCAAGTACATTAAAGTGAACGGTGTGTGGGGCGATCACTGGATCTGCTTTGGAACGGAATCCTATTAGAtgttatgatttattttttgatGATTTAGACCTGGATAAAGATCTCAAACATGGATGGAGTAAACATGAATGCTAACGgcaacactgctgctgctcagggGAAGGCCTCTTCCAACTCCACCATATTCAACCGCTCCGACCGCTCCGAGTTCCAGCGGCCTGATGTCGAGACGCCGGTCCTGAAGTTCTTCCGGACTCTCTCTGAAGAGACAGACACTTCTCCCGGGAACGTCAACAGCAGTCATGGAACATCTGTTGAAGTCaatggaaatgagaggagagcaggggtTTCAAGTGCAGTAGGTGTGGTGCAGAAGAATGGAGaatccaccacccccaccacagtTGTACGGACcaatgagagagaggaagtatTTGGAACAGAGGGCTGCAGGGAATTGGAGTCTGTCGATGGGATGCCACCAGGGACTAGCTGTTCTGTGGATtgtgacaggaatggaggtctgACTCAATGGATTCCAGAAGCACAGAGTGACATCATGGACTTAGAGGAGGAAGATGCAAATGGTAAATATATTGTCCAGTCAAAAGACTACATCGCAGATAAGAAGACCCATTTACAAGGATATGGTGGGTCAACAGACCAATCGGATGGCTGCATTCCAGAAAGGACATCTCACTTACAAGGATATGTGGGGCCAATGGATTCTTTAAAAAATGAACTGAGAGTGTCCATAGACAAACATAGGAACAGTGGAGCATCAGAAGACTGCAGTATGGAGGAGCctatagacacagacacacagtgtgCCTCAGGCAGCACCAATCAGGACGTAGACACTGACTGTCCCAGTACAGACCAGTCAGAGACAACTGACCAGCAACGTCTGTACAGATCCACAGACAAAATTCATCAAGATATGTTAAAAAGTGATGAAATCACTAACAATGATGACAAATACAACGCAAAGGATGTTCGCAACAACACAGATGAATTTACAGACAAGCACAACATACTGACCTGGTTAACAGACAGTGAAACCAATCCAGCAAGCAGCAGTACACAGGAAACATGTACAGATGATAAGCAAATCCAAGACTTACCAACACCTGATGATGATTTGACCAGAGACCTTGCTAACCCTACTGCAGTAAGAGCTGGTAAACCTCAAGACTTACCGACACCTGATGATGATTTGACCAGAGACCTTGCTAACCCTACTGCAGTAAGAGCTGAGAAACCTCAAGACTTACCAACACCTGATGATGATTTGACCAGAGACCTTGCTAACCCTACTGCAGTAAGAGCTGGTAAACCTCAAGACTTACCGACACCTGATGATGATTTGACCAGAGTCCTTGCTAACCCTACTGCAGTAAGAGCTGAGAAACCTCAAGACTTACCAACACCTGATGATGATTTGACCAGAGACCTTGCTAACCCTACTGCAGTAAGAGCAGGTAAACCTGACACCAGTGGAACACCATCTTCAAACAACACAACTGTGATTCTAACCATGATCAGGACTGAACCTGTTTCTGAGGAGCAGCAGCATACAGTCGCTGAAACAGAGACTGTTGTTGGTACTACAGGACAGACTGAGGTGCCAGGATGTGGGTCTAGCATTGAGGTGAAGGTGAGAGGGGAGACCTACCCACACTCAGATTCAGACAGTATCACTGGGGCAGtagtggagacaggagagaccgATACTGGGAATGACAGGGTGGTGTCTTGTCCCTCTGAAACTATGCTGTCCTCTGAAGTGATAGAGAGAGCACCTGCAGAGGCAAAGTCTACAGCCGGGCCTTCTCACCCAACAAGTCCCCAGGGACCAACCTCAACCCCAGGTCCAACCAGTGGCCCTCCCCCTGGCACCACCTCCATCCGAGCCACCTTCTCCCTCGGTTCCCCGGTGGAGAAGCCCCTCCAGCTGCCTGCCCTCTTCAGTGGTTTGAGGACCCTAAAGAAGGGAGCGGCAGGGTCGGATCAGGACATAGTGGCCCTGATcaaaccaccatcaccatcagaCCTGGGTGTGAACAAGCCTGTGAGGAGAGAGCAGAAGACGGTTCGCAGGAGGCAGGGGACTTTCTTGGACCAGCTCTCCCAGTTCCTGAACATGGAGAAGGATGACAACAGTAAGATGAAGGagtctacaggagaggagagtaagGAGTCTACAGGAGAGGAAACGAGGGAgtctacaggagaggagatgagggagtctacaggagaggagagtaagGAGTCTacaggagaagagatgagggagtctacaggagaggagaggaaggagtccGAGCCGTCAGAAGAGTCTAAAGAATTCAGCAATGAAcctgaggaagagagggaggtgaaagagaagacagagaaggatacagagacagaaaagacagagcaggaaacagagaaagagaagactgAAGGACGGTCTGTGATAAAGCCTCCGGAATCTTCAGAACCTTCTGAGACTCTAGAAACTAAGGAACCCAAGGAACCTCAGAAGCCTCCCTCCAGGGCGGAGGTGGCATTTGATGAGTTCAAGGCCTTTTTCGTCCCCAGGCCCCTGAGGCGGGACCAGGATGCAGTGAAGCGGAAGGCCTGGATCTTTGAGAGAACCTTCAAGACTCCTGAAAAGAAAACTGATTCAAAATCGCGGGCGTCGACCCCAGGTGATGGAGAGGACCGGTCCACCCCAGGCCGTCTGCAGGCCATCTGGCCCCCAACTAAGGAGGAGAAAGTGGGACTGAAATACACAGAAGCCGAACACCAGGCAGCCCTCCTGCAGCTGAAGAGAGAATGCAACGAGGAGATGGAGAAGATACAgGAGGACTTTGGAAAGCAGCTGCGCCAGGTGAGAGGGGACAATGAGGAGCGTGTATTCCACCTGGAGTGCAACCTGGCCCGGCTACAGAGCGACCTGGCCCTGGGTGCGCACCACCGTCGTGGAGACCTCCGAGACGTTGCCGTATCCACGGGAGATGACCTCTCACAACGGACCGTCCACAACGTGTGCGTCCAGACGGACCGTCAAACCTTTATCAGAACCcctgaggatgaggagggaggtgTCAGGCTGGGCCCCCAACCCCCCCTCAACGTGCCTAAGAGACTGGGCCTGGCTTCTATCAGTCTAAATCTGTCTGGACAGGctacctctccctcttctccctcttcttccccccttctccctcctccacctccccccccTCCTTTCCCAAAACAGACCCAGGGACTTGACGGCCCTCCTCCAACCTCTCCACCAGGTTGCAACCCTcaaccccctccacctccaccaggctgcagccctccaccccctccacctccaccaggctgtgttccccctccccctccaggtgtGTTGGTGGATAAACCCCACAGGAAGCCTGCTGTGGAACCAGCCTGTCCCATGAAGCCTCTGTACTGGACCAGGATACAGATACAGGACAAtAAGGACACACTGTGGAACTCTCTTGTGGAACCAGACATCATCAACACCACAGAGTTTGAAGATCTGTTCTCCAAGACCACCTTGCAGACCAAGAAAAAACCTCTGTCAGAGGCCTATGAGAAGAAAGCCAAGGCCAAGAAGGTCATCAAGCTGCTGGATGGGAAGCGTTCCCAGGCTGTAGGCATACTCATCTCTAGTCTGCACCTGGAGATGAATGACATACAGCAAGCTGTGCTGACGGTGGACAACTCCATCGTGGACATGGAAACCATCCAGGCCTTATATGAAAACAGAGCCCAGCCCGATGAGCTGGAGCAGATAACGAGACACTACCACACTTCAGAGGAGGAACTGATCAAGTTGCTGGACAAACCTGAACAGTTCCTCTATGAGTTATCTCAGATACCAGACTTCCCAGGCAGAGCTTCATGTATCATCTTCCAGTCTGTCTTCAAAGACGCCATCGCCTCCGTACAGCGGAAGGTTGACATCGTCTCTCGCGTCTGCAAGGATCTGTTGGAGACCTCCAGTGTGAGGGAAGTAATGGGTCTGGTTCTAGCTCTGGGGAACCACATGAACGGGGGCAACaggaccagaggacaggctgACGGTTTCGGGCTGGAGATCCTGCCCAAACTGAAAGACGTCAAGAGCAGGGACAATCGAATCAGTCTGGTCGACTACGTGGTATCATACTATCTCCGCAATCTGGATGAGAACGCTGGGACAGAGAGAAGTGTCTTCCCTCTCCCCGAGCCTCAGGATGTGTTCCTGTCAGCCCAGGTCAAGTTTGAAGACATCACCAAGGAGCTGAGGCAGCTGAGACGGGACCTGACAGTGTGTGAGAAAGGTGTTCAGAAGGTGTGTTCCAGCTCTCCAGACGAGCACCTCCAGCCGTTTAAGGACAAGATGGAGGCGTTCGTTCTGATTGCGCATAAAGAACATGATGACGTGCATGCCCAGTTGATGTTTGCACAAAAAAGCTTCCACGAGCTGGTGACGTTCTTAGGGCTGAAGCCCAAGACAGGAGAGACCGAGGTGGCGACAGGTCACTTCTTCATGCTGTGGTTTGAGTTCTGTACCGACTTCATGaccaggtggaggagagagaacaagaatatCTCcaaagagagaCTGAAAGAGGCTCAGCTGTCGGTGAAGAAGATTACAGCAGACAAGAAGGTGGAAACTAGGAAGATCAACCCTAACAGTCTGaaagagagactgcGCCAGAAAGAAGCCAACATGGTGGCCACAAGctgagagacagaacaggacagagaagAACAGGACAGAGAAGAAAATACATTAATGAGAAGAGTGATGGGTTGATGTGTGAGGGGACTCGGGA

Function

NR:

description
formin-like

GO:

id name namespace
GO:0045010 actin nucleation biological_process
GO:0005884 actin filament cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984665.1 True 5272 mRNA 0.50 17 8283880 8341125
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110529309 LOC106571095 coding upstream 348885 7929359 ~ 7934995 (+)
LOC110529308 LOC106571096 coding upstream 360256 7913950 ~ 7923624 (+)
gpr176 LOC106571060 coding upstream 746951 7515258 ~ 7536929 (+)
LOC110529173 LOC106571059 coding upstream 786741 7476858 ~ 7497139 (+)
LOC110529303 LOC106608191 coding upstream 882470 7381850 ~ 7464260 (+)
LOC110529318 LOC106571115 coding downstream 44325 8385450 ~ 8393449 (+)
LOC100136137 LOC106571105 coding downstream 61099 8402224 ~ 8423584 (+)
LOC110529321 LOC106571114 coding downstream 401414 8742539 ~ 8757466 (+)
LOC110529326 LOC106571110 coding downstream 563464 8904589 ~ 8914229 (+)
LOC110529322 LOC106571110 coding downstream 587153 8928278 ~ 8937714 (+)
G670004 NA non-coding upstream 2914 8280763 ~ 8280966 (+)
G670000 NA non-coding upstream 10950 8272040 ~ 8272930 (+)
G669988 NA non-coding upstream 25285 8258186 ~ 8258595 (+)
G669814 NA non-coding upstream 57792 8225844 ~ 8226088 (+)
G669788 NA non-coding upstream 105074 8178356 ~ 8178806 (+)
G669992 NA non-coding downstream 1220 8342345 ~ 8344560 (+)
G670032 NA non-coding downstream 19651 8360776 ~ 8361086 (+)
G670058 NA non-coding downstream 105911 8447036 ~ 8447271 (+)
G670166 NA non-coding downstream 123854 8464979 ~ 8465229 (+)
G670171 NA non-coding downstream 127129 8468254 ~ 8468491 (+)
G668626 NA other upstream 1284574 6998228 ~ 6999306 (+)
G668628 NA other upstream 1292272 6989854 ~ 7076589 (+)
G668649 NA other upstream 1312276 6971079 ~ 6971604 (+)
G668368 NA other upstream 1837435 6445880 ~ 6446445 (+)
G668334 NA other upstream 1870793 6412000 ~ 6413087 (+)
G670034 NA other downstream 28999 8370124 ~ 8376409 (+)
G670169 NA other downstream 125590 8466715 ~ 8467460 (+)
G670939 LOC106571120 other downstream 953370 9294495 ~ 9352851 (+)
LOC110529331 LOC106571120 other downstream 1011798 9336069 ~ 9366106 (+)
G670992 NA other downstream 1184598 9498702 ~ 9613040 (+)

Expression

LOC110529313(LOC106571113) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 20.
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LOC110529313(LOC106571113) Expression in each Bioproject

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LOC110529313(LOC106571113) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network