XLOC_025721 (BX649397.1)


Basic Information

Item Value
gene id XLOC_025721
gene name BX649397.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 50537127 ~ 50552748 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050589
AGTCTGTTTCTGCCTATCACCATGAGTGATTCAGAACTCCAAGAGCAACTGATAAACCTTGATACATGGAGTTATCAAGATCTCAATTATAAGCTCAAGTCTTGATGACAACTTGCAGGAAGCACCACCAGTAAAGACACCTGAACCAAGGCTCATAGGATCCCCAATCTTCCCAACTGTGAGAGGGCCTTGCTCCAGAGACTGCCTGTGAAATGGAGTGAGGCATACCAGGATATGTGTGGTTTAACTGTTGGGCTGGAGGTTGGAACAGTGCAGTGTTTCCTCTCTAGGATTGCAGTGACCAGACATGCTACTGTAACTCTCATGGTCATGTGCTGGAATTAGCAGATATTCAACAATTTGGCCATCTCACTGACCTGTTGATATCAGAAGACCCCAACAGCTCTGCAAAGCAAGTTGCAAAACAGAAACCAATTGGAAGACTTTGGTCTGTGATGTAGAGGAGTGGGCAGcagaagcaaagacaagaaaaaaacagaagtgatatggaTATCTTCGCCTCATGGCATGACTCTGTTGATCTAACAACAAAGAAAAGGGCGTTCAACATCTTCCTGCTAGTCAGGATTCTTCAGGAGAAGCAGAGGATTCTTGTGGCAGAGATGGCCAACCGCTATATATACCTTTCAACTCATCCTGGTTCCTTCAAAGAACTTTCCTACTTGTTTGCTACTGAAAAATTCGACATGTGGCCCAAAAGAAGAGGGGTTGAAAGGTCTGTGGATCATCATTCTCAgaaagcaacaaaataactgcaaaataaacaacaatacgaGGGTGCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097769

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050589 True 803 lncRNA 0.44 7 50537127 50552748

Neighbor

gene id symbol gene type direction distance location
XLOC_025720 gas7a coding upstream 116906 50310684 ~ 50420221 (+)
XLOC_025719 NA coding upstream 248639 50286780 ~ 50288488 (+)
XLOC_025718 rsad1 coding upstream 267982 50155245 ~ 50269145 (+)
XLOC_025717 zgc:103625 coding upstream 461937 50069204 ~ 50075190 (+)
XLOC_025716 NA coding upstream 776431 49753768 ~ 49760696 (+)
XLOC_025722 gsg1l2a coding downstream 50118 50602866 ~ 50781505 (+)
XLOC_025723 NA coding downstream 242573 50795321 ~ 50796217 (+)
XLOC_025724 NA coding downstream 255889 50808637 ~ 50809193 (+)
XLOC_025725 NA coding downstream 458541 51011289 ~ 51023057 (+)
XLOC_025726 NA coding downstream 864674 51417422 ~ 51446996 (+)
XLOC_025429 BX649540.1 misc upstream 20288091 30248739 ~ 30249036 (+)
XLOC_025715 NA non-coding upstream 912449 49565257 ~ 49624678 (+)
XLOC_025713 NA non-coding upstream 1030955 49490554 ~ 49506172 (+)
XLOC_025712 NA non-coding upstream 1077203 49455762 ~ 49459924 (+)
XLOC_025730 NA non-coding downstream 1205597 51758345 ~ 51758711 (+)

Expression


Co-expression Network