XLOC_025722 (gsg1l2a)


Basic Information

Item Value
gene id XLOC_025722
gene name gsg1l2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 50602866 ~ 50781505 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050590
CTGATAGCATTAGAGACGGAGTTGAATTAGAGCAGCTGGCATTCGTGAAAGCTCAGTGGCCGTCCAGCTgctcaatcaagaaaaagaaagcaCTGATGAGACACACACATCTACAAGATCCAATCAACCTCAAGATACTCACTGCAATAAGTTTGAATGTCTGAATCAAGGAGCCCAAAGCCAGGATTACTCATCTCCTTGTGCCTCCTGGATCACAATGGGTATACAGCGAGCTCAGAGGGCATCGCTGGCTCTTACACTCAACTATGTGGCATTCGTAATGGCAGTCTCAGCCGTTACCACCAGCTACTGGTGTGAAGGGACCAGAAAAGTGGTGAAGCCTTTCTGTATGGGACCAGTGAAAGGCAAGCAGACGTACTGCATTCGTTTTAACAGCACCAACGTCAATGACACAAAGCTGGTGCAGTACATCTACGAGACCGGAGAAGAAAAGTTTCTCATGAGGAAGTTTCATGCAGGCATTTGGTTCTCCTGTGAGCAAACCATGGACTTAATAGGATTTAATTGTAGGAGCTTTTTTGAGATTGCACCAGATCATGAAAGAGgaGTTCTCTGGTTGTGTATTGTGGCTGAGTGTCTGTATATTGCTCTGCTGTTCACCGGTGGAACTCTGATGCTGATAGAGATGTGTCCATGCTTTAGCATGATGAACAGACTCAAGCTCAGTGCCTTTGCAGCTCTGTGCACTGCTCTCTCAGGTCTTTTTGGGATGGTTGCACATATGATGTTCACCACAGCTTTCCAGCTGGCAGTCCAGCTTGGTCCAGAAGACTGGAGACCAAAGACATGGGACTACAGCTGGTCTTATCTtctGGCGTGGTGTTCGTTCGGCACCTGTATGAGCTCTGCGGTCACAGCTCTAAACCATTACACCAAAACCATCATTGAGTTCAAGTTCAGGCGGAGGACCATTGAGAAGAAACTGCGCATCAAGCAGAGGATTCTGGAGCTTGACCTGCCAGAAGACTTATGGTACATAACATTATTACAAGACCAAGCAGACCAACACACTACTCTGTATGTAAATGGCCCTGGATCATCCTGCATCAACCCCAGTATACTGGACAACTGGGACAGAGAATACTGCTAAAAATCCACTGATCCACTTCTGCACATGATTTTGTgctgaaaattttattttattgggcTATATTCAAGAGAGCAATATATTGACTAAGTTCTGCTTTTGTTCTAATacgattaatttattaatttaattgaggtttaaaaataattataagttAAAGGAAGAGTTCattcaaaactaaaaattctTTCTTCATCTACTATTGCTTAACTTCTCACAAACCTTTTGTTCTGATGAACAAAAAAGAtgtgtaaacctgtaaccattgacttacatagtatttgttttatagtCAATGGTTAAAAGTttgtaacatttttcaaaatatcttcttttgtgttaataaaataagttatatgttattttgtgttcactcataaaggtttggaaccacattGATAAATGAtgtgtaaatttgtatttttggtcaAATGTCACATTGCATTTTTTCTCAATtgccaataaataaaaataaataaataaataaataaatacatacatacatgcatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacataaataaattgaaataagtTCTCAGTTGCCTGCCCTTATTTAGCGAACTGCGCAGTCTGTTGGCAATACCCTAAACCATTTCACATGGTAAAGCGCAATAGGTGAGAAATGATGTCAGGGTTGTATACGGCACACAAGAGGCttcttcaatttaattaaattcatttagcacttttacaatgtagattgtgtcaaagcagtttcaaatagaagttctagtaaattgcaATTGAAAATGGTTGGGGCGTATTGTTTCACTTAACTCACAAATCGATACGATTCACGATTTagtcaatatgttttttttattatattttttaaacaatattagttaaaacaaatttaaggtaaaaaaaaaaatatatatatatat
>TCONS_00050591
GACGGAGTTGAATTAGAGCAGCTGGCATTCGTGAAAGCTCAGTGGCCGTCCAGCTgctcaatcaagaaaaagaaagcaCTGATGAGACACACACATCTACAAGATCCAATCAACCTCAAGATACTCACTGCAATAAGTTTGAATGTCTGAATCAAGGAGCCCAAAGCCAGGATTACTCATCTCCTTGTGCCTCCTGGATCACAATGGGTATACAGCGAGCTCAGAGGGCATCGCTGGCTCTTACACTCAACTATGTGGCATTCGTAATGGCAGTCTCAGCCGTTACCACCAGCTACTGGTGTGAAGGGACCAGAAAAGTGGTGAAGCCTTTCTGTATGGGACCAGTGAAAGGCAAGCAGACGTACTGCATTCGTTTTAACAGCACCAACGTCAATGACACAAAGCTGGTGCAGTACATCTACGAGACCGGAGAAGAAAAGTTTCTCATGAGGAAGTTTCATGCAGGCATTTGGTTCTCCTGTGAGCAAACCATGGACTTAATAGGATTTAATTGTAGGAGCTTTTTTGAGATTGCACCAGATCATGAAAGAGGTGGgaGTTCTCTGGTTGTGTATTGTGGCTGAGTGTCTGTATATTGCTCTGCTGTTCACCGGTGGAACTCTGATGCTGATAGAGATGTGTCCATGCTTTAGCATGATGAACAGACTCAAGCTCAGTGCCTTTGCAGCTCTGTGCACTGCTCTCTCAGGT

Function

symbol description
gsg1l2a Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000086204

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050590 False 2049 mRNA 0.38 5 50602866 50781505
TCONS_00050591 True 711 mRNA 0.47 3 50602880 50611009

Neighbor

gene id symbol gene type direction distance location
XLOC_025721 BX649397.1 coding upstream 50118 50537127 ~ 50552748 (+)
XLOC_025720 gas7a coding upstream 182645 50310684 ~ 50420221 (+)
XLOC_025719 NA coding upstream 314378 50286780 ~ 50288488 (+)
XLOC_025718 rsad1 coding upstream 333721 50155245 ~ 50269145 (+)
XLOC_025717 zgc:103625 coding upstream 527676 50069204 ~ 50075190 (+)
XLOC_025723 NA coding downstream 13816 50795321 ~ 50796217 (+)
XLOC_025724 NA coding downstream 27132 50808637 ~ 50809193 (+)
XLOC_025725 NA coding downstream 229784 51011289 ~ 51023057 (+)
XLOC_025726 NA coding downstream 635917 51417422 ~ 51446996 (+)
XLOC_025727 ttyh2l coding downstream 782190 51563695 ~ 51657722 (+)
XLOC_025429 BX649540.1 misc upstream 20353830 30248739 ~ 30249036 (+)
XLOC_025716 NA non-coding upstream 842170 49753768 ~ 49760696 (+)
XLOC_025715 NA non-coding upstream 978188 49565257 ~ 49624678 (+)
XLOC_025713 NA non-coding upstream 1096694 49490554 ~ 49506172 (+)
XLOC_025730 NA non-coding downstream 976840 51758345 ~ 51758711 (+)

Expression


Co-expression Network