Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110529331 |
| gene name | LOC106571120 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 9336069 ~ 9366106 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tumor necrosis factor alpha-induced protein 2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021611464.2 | False | 2647 | mRNA | 0.49 | 12 | 9336069 | 9366105 |
| XM_036984693.1 | False | 2584 | mRNA | 0.49 | 12 | 9342475 | 9366106 |
| TU764320 | False | 386 | TUCP | 0.48 | 2 | 9352923 | 9353855 |
| TU764321 | True | 487 | TUCP | 0.52 | 5 | 9354902 | 9361385 |
9,332,000
9,336,000
9,340,000
9,344,000
9,348,000
9,352,000
9,356,000
9,360,000
9,364,000
9,368,000
9,372,000
9,376,000
9,380,000
9,384,000
9,388,000
9,392,000
9,396,000
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529330 | LOC106571119 | coding | upstream | 18378 | 9294458 ~ 9317691 (+) |
| LOC110529329 | NA | coding | upstream | 72671 | 9260370 ~ 9263398 (+) |
| LOC118965491 | NA | coding | upstream | 78366 | 9253411 ~ 9257703 (+) |
| LOC110531071 | NA | coding | upstream | 82793 | 9251747 ~ 9253276 (+) |
| LOC110529327 | LOC106571118 | coding | upstream | 122415 | 9201189 ~ 9213654 (+) |
| LOC110529332 | LOC106571122 | coding | downstream | 16981 | 9383087 ~ 9384819 (+) |
| LOC110529333 | LOC106571123 | coding | downstream | 21868 | 9387974 ~ 9398791 (+) |
| LOC110529179 | LOC106571124 | coding | downstream | 45266 | 9411372 ~ 9523043 (+) |
| LOC110529338 | LOC106571128 | coding | downstream | 605975 | 9972081 ~ 9979621 (+) |
| LOC110529340 | NA | coding | downstream | 677072 | 10043178 ~ 10046513 (+) |
| G670914 | NA | non-coding | upstream | 59989 | 9275825 ~ 9276080 (+) |
| G670890 | NA | non-coding | upstream | 68631 | 9267184 ~ 9267438 (+) |
| G670888 | NA | non-coding | upstream | 70059 | 9265790 ~ 9266010 (+) |
| G670886 | NA | non-coding | upstream | 70651 | 9265162 ~ 9265418 (+) |
| G670887 | NA | non-coding | upstream | 71634 | 9264212 ~ 9264435 (+) |
| G670981 | NA | non-coding | downstream | 26686 | 9392792 ~ 9393267 (+) |
| G671024 | NA | non-coding | downstream | 89831 | 9455937 ~ 9457324 (+) |
| G671028 | NA | non-coding | downstream | 94754 | 9460860 ~ 9461198 (+) |
| G671002 | NA | non-coding | downstream | 112188 | 9478294 ~ 9479092 (+) |
| G671044 | NA | non-coding | downstream | 131595 | 9497701 ~ 9498165 (+) |
| G670169 | NA | other | upstream | 868609 | 8466715 ~ 8467460 (+) |
| G670034 | NA | other | upstream | 959660 | 8370124 ~ 8376409 (+) |
| G668626 | NA | other | upstream | 2336763 | 6998228 ~ 6999306 (+) |
| G668628 | NA | other | upstream | 2344461 | 6989854 ~ 7076589 (+) |
| G668649 | NA | other | upstream | 2364465 | 6971079 ~ 6971604 (+) |
| G670992 | NA | other | downstream | 159617 | 9498702 ~ 9613040 (+) |
| G671542 | LOC106571127 | other | downstream | 483404 | 9849510 ~ 9851825 (+) |
| LOC110529360 | eva1a | other | downstream | 1676238 | 10936067 ~ 11128126 (+) |
| G673590 | NA | other | downstream | 2567575 | 11933681 ~ 11939152 (+) |
| LOC118965493 | LOC106607564 | other | downstream | 2662796 | 12028902 ~ 12035474 (+) |
| G670939 | LOC106571120 | other | upstream | 72 | 9294495 ~ 9352851 (+) |
