LOC118965597


Basic Information

Item Value
gene id LOC118965597
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 9774005 ~ 9791069 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986822.1
ATGACTTTCCAAGGCCAGCGATGCAAGcgcatcctgctgtctctactgATCCGTTGTTGGATACAAGTACCCAAACAGAGTGATCAAAGCATCAAGCATCCCACCAGACTATCAGTGTCCAACCAGCCTCCAACCAGACAACCAGTGTCAATCCAGCCTCCCACCAGACAATCAGTGTCCATCCAGCCTCCCACCAGAAAATCAGTGTCCACCCAGCCTCCAACCAGACAACCAGTGTCCATCCAGCCTCCCACCAGACTACCAGTGTTCATCCAGCCTCCCACCAGACAACCAGTGTCCACACAGCCTCCCACCAGACAACCAGTGTCCACCCAGCCTCCCACCAGACAACCAGTGTCCACCCAGCCTCCAACCAGACAACCAGTGTCCATCCAGCCTCCCACCAGACTACCAGTGTTCATCCAGCCTCCCACCAGACAACCAGTGTCCATCCAGCCTCCCACCAGACAACCAGTGTCCATCCAGCCTCCCACCAGACAACCAGTGTCCATCCAGCCTCCCACCAGTCTACCAGTGTCCACACAGCCTCCCACCAGACAACCAGTGTCCACCCAGCCTCCCACCAGACAACCAGTGTCCATACAGCCTCCTACCAGACAACCAGTGTCCATCCAGCCTCCCACCAGACTACCAGTGTCCACCCAGTCTCCCACCAGACAACCAGTGTCCATCCAGCCTCCCACCATCTCTGTGACCAGTGACCACTAG

Function

NR:

description
PREDICTED: em-like protein GEA1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986822.1 True 729 mRNA 0.57 2 9774005 9791069

Neighbor

gene id symbol gene type direction distance location
LOC110529336 LOC106571151 coding downstream 123925 9644525 ~ 9650080 (-)
LOC100301659 LOC100301659 coding downstream 241353 9525869 ~ 9532652 (-)
cdc42bpb LOC106571112 coding downstream 648770 9012231 ~ 9125235 (-)
LOC110529323 LOC106571110 coding downstream 774311 8989445 ~ 8999694 (-)
LOC118965490 LOC106571111 coding downstream 894077 8864199 ~ 8879928 (-)
kif26aa LOC106571127 coding upstream 34913 9825982 ~ 10013023 (-)
LOC110529344 LOC106571131 coding upstream 289768 10080837 ~ 10086410 (-)
myh6 LOC102786665 coding upstream 349600 10140669 ~ 10148583 (-)
LOC110529348 LOC106571135 coding upstream 361726 10152795 ~ 10191112 (-)
LOC110529349 NA coding upstream 403781 10194850 ~ 10212544 (-)
G671449 NA non-coding downstream 12221 9761578 ~ 9761784 (-)
G671447 NA non-coding downstream 13564 9760238 ~ 9760441 (-)
G671438 NA non-coding downstream 19433 9754364 ~ 9754572 (-)
G671431 NA non-coding downstream 24771 9748955 ~ 9749234 (-)
G671380 NA non-coding downstream 61225 9712565 ~ 9712780 (-)
G671514 NA non-coding upstream 27950 9819019 ~ 9819232 (-)
G671521 NA non-coding upstream 31357 9822426 ~ 9822731 (-)
G671823 NA non-coding upstream 236829 10027898 ~ 10028450 (-)
G671820 NA non-coding upstream 243703 10034772 ~ 10121973 (-)
G671122 NA other downstream 426126 9346384 ~ 9347879 (-)
G670905 NA other downstream 508912 9263850 ~ 9265093 (-)
G670733 LOC107575789 other downstream 812274 8949694 ~ 8961731 (-)
G670549 NA other downstream 1196225 8577051 ~ 8577780 (-)
G670097 NA other downstream 1431885 8340990 ~ 8342120 (-)
G672436 LOC107575789 other upstream 947155 10738224 ~ 10738686 (-)
G673053 NA other upstream 1553404 11344473 ~ 11344782 (-)
LOC110529377 LOC106571175 other upstream 2193765 11984834 ~ 11997491 (-)

Expression

LOC118965597 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.2.
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LOC118965597 Expression in each Bioproject

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LOC118965597 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1.5.
End of interactive chart.

Co-expression Network