XLOC_025723


Basic Information

Item Value
gene id XLOC_025723
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 50795321 ~ 50796217 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052794
GAACCAAGAACTGCTGGTGACCCTGAAGAAGAAACGAACATTTCCTCTCCGGGCCACCAGCAGCTTTTGGTTGAGCTGCTGGCGCCCCGGTGAACAGGTCACCAGCAGTCAAGAGCTGTTGGTGACCCAGAGAGGAAATAAAACCGTTGGTGGTCTAATCTGTCTAATGTCCTTCACCAGATAGCCTCGAATCCAACCCAAGCACTAGGCAACAGTGGCGCTTCTATGGCTTTCTGACTGGCTACCTAACCTCCATCTCTGGGCACCGCTGTGGAGTCTTCCAGAATCTCACAATCCAGGAGGTTGAAGAGGCCTCCAGAAGCCCCGACGAGTCTGCTTATGTCATTAATGTGAGTATGGCGCAAGTAAGGTGGGGGTCACCAGTAGCATGCTCTCTCACTCACTGCTTGTTCTCTGACGGCAGATTACcactcacaaaacaaacagagcCTTTGGGGCGGCGCAGCTGTCCCTAAACAGGGAGGAATACAGCTGGTTCCGCAGGTTTTTGGCACTGCGGGCTGGTCTCCCCGGAGGGAGCCAGGCTacctatttctttttcacttccagAGCCAGTCCTTGTCGGACCCTGAACAAGTACTTTCAGTCTGCTTGGGTCAGTATGGGCCTTCCAGGCAAACCCACCTTTACTGACGTACGGACTGCGATCGCGACCCATGTGAGTAGGCATTGTGACGCCCCTGTAACTACCAGCGGCGGCTTCGATCCTAATCAAGCTTCTGTCTCTCTCCGACGCAGGCAAAGAATGCACACTCCTCAGaggatcgccgcaaggtggcgcaaTTCATGTGCCATGACACTTCAACCTCAGATAAGTTCTACGCACTTCACCTCGGACCTCTCCAAGCACGCGAGCGCCGCTCTGTTTGAAAGGgc

Function

GO:

id name namespace
GO:0044430 obsolete cytoskeletal part cellular_component
GO:0005854 nascent polypeptide-associated complex cellular_component
GO:0015630 microtubule cytoskeleton cellular_component
GO:0005737 cytoplasm cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052794 True 897 lncRNA 0.54 1 50795321 50796217

Neighbor

gene id symbol gene type direction distance location
XLOC_025722 gsg1l2a coding upstream 13816 50602866 ~ 50781505 (+)
XLOC_025721 BX649397.1 coding upstream 242573 50537127 ~ 50552748 (+)
XLOC_025720 gas7a coding upstream 375100 50310684 ~ 50420221 (+)
XLOC_025719 NA coding upstream 506833 50286780 ~ 50288488 (+)
XLOC_025718 rsad1 coding upstream 526176 50155245 ~ 50269145 (+)
XLOC_025724 NA coding downstream 12420 50808637 ~ 50809193 (+)
XLOC_025725 NA coding downstream 215072 51011289 ~ 51023057 (+)
XLOC_025726 NA coding downstream 621205 51417422 ~ 51446996 (+)
XLOC_025727 ttyh2l coding downstream 767478 51563695 ~ 51657722 (+)
XLOC_025728 chmp6a coding downstream 863941 51660158 ~ 51677582 (+)
XLOC_025429 BX649540.1 misc upstream 20546285 30248739 ~ 30249036 (+)
XLOC_025716 NA non-coding upstream 1034625 49753768 ~ 49760696 (+)
XLOC_025715 NA non-coding upstream 1170643 49565257 ~ 49624678 (+)
XLOC_025713 NA non-coding upstream 1289149 49490554 ~ 49506172 (+)
XLOC_025730 NA non-coding downstream 962128 51758345 ~ 51758711 (+)
XLOC_025731 NA non-coding downstream 1099107 51895324 ~ 51900899 (+)

Expression


Co-expression Network